Gene : Glyma.18G019600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF66 - CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 Genomic Order:  196
Name:  ? Glyma.18G019600 Secondary Identifier:  ? PAC:30555001
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G019600 0.5kb upstream 0.5kb upstream 11076 true Chr18: 1442416-1453491 Glycine max
Glyma.18G019600 0.5kb upstream 0.5kb upstream 500 false Chr18: 1452992-1453491 Glycine max
Glyma.18G019600 0.5kb downstream 0.5kb downstream 11076 true Chr18: 1441916-1452991 Glycine max
Glyma.18G019600 0.5kb downstream 0.5kb downstream 500 false Chr18: 1441916-1442415 Glycine max
Glyma.18G019600 1.0kb upstream 1.0kb upstream 11576 true Chr18: 1442416-1453991 Glycine max
Glyma.18G019600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1452992-1453991 Glycine max
Glyma.18G019600 1.0kb downstream 1.0kb downstream 11576 true Chr18: 1441416-1452991 Glycine max
Glyma.18G019600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1441416-1442415 Glycine max
Glyma.18G019600 2.0kb upstream 2.0kb upstream 12576 true Chr18: 1442416-1454991 Glycine max
Glyma.18G019600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1452992-1454991 Glycine max
Glyma.18G019600 2.0kb downstream 2.0kb downstream 12576 true Chr18: 1440416-1452991 Glycine max
Glyma.18G019600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1440416-1442415 Glycine max
Glyma.18G019600 5.0kb upstream 5.0kb upstream 15576 true Chr18: 1442416-1457991 Glycine max
Glyma.18G019600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1452992-1457991 Glycine max
Glyma.18G019600 5.0kb downstream 5.0kb downstream 15576 true Chr18: 1437416-1452991 Glycine max
Glyma.18G019600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1437416-1442415 Glycine max
Glyma.18G019600 10.0kb upstream 10.0kb upstream 20576 true Chr18: 1442416-1462991 Glycine max
Glyma.18G019600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1452992-1462991 Glycine max
Glyma.18G019600 10.0kb downstream 10.0kb downstream 20576 true Chr18: 1432416-1452991 Glycine max
Glyma.18G019600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1432416-1442415 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
122311347 5265 Fabidae View MSA
124063700 5270 Rosid View MSA
123740295 5271 Pentapetalae View MSA
122787406 5272 Eudicot View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.28833 0.0 14.1581   Low
cufflinks 8.83664 0.0 24.365    
cufflinks 3.41465 0.0 9.1186   Low
cufflinks 11.845 0.0 33.6967    
cufflinks 19.4496 0.0 59.198   High
cufflinks 17.6638 0.0 53.0652   High
cufflinks 6.45696 0.0 17.4077    
cufflinks 14.4468 0.0 42.1863    
cufflinks 11.9427 0.0 33.9935    
cufflinks 26.482     High High
cufflinks 1.132       Low
cufflinks 4.961        
cufflinks 19.331     High High
cufflinks 17.627     High High
cufflinks 1.669       Low
cufflinks 7.239     High  
cufflinks 8.903     High  
cufflinks 9.57     High  
cufflinks 9.488     High  
cufflinks 6.117        
cufflinks 2.208       Low
cufflinks 7.033        
cufflinks 10.64     High  
cufflinks 1.201       Low
cufflinks 5.652        
cufflinks 6.618     High  

0 Strain