Gene : Glyma.18G009700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10836:SF59 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC1, CYTOSOLIC Genomic Order:  96
Name:  ? Glyma.18G009700 Secondary Identifier:  ? PAC:30556591
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G009700 0.5kb upstream 0.5kb upstream 4774 true Chr18: 691244-696017 Glycine max
Glyma.18G009700 0.5kb upstream 0.5kb upstream 500 false Chr18: 695518-696017 Glycine max
Glyma.18G009700 0.5kb downstream 0.5kb downstream 4774 true Chr18: 690744-695517 Glycine max
Glyma.18G009700 0.5kb downstream 0.5kb downstream 500 false Chr18: 690744-691243 Glycine max
Glyma.18G009700 1.0kb upstream 1.0kb upstream 5274 true Chr18: 691244-696517 Glycine max
Glyma.18G009700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 695518-696517 Glycine max
Glyma.18G009700 1.0kb downstream 1.0kb downstream 5274 true Chr18: 690244-695517 Glycine max
Glyma.18G009700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 690244-691243 Glycine max
Glyma.18G009700 2.0kb upstream 2.0kb upstream 6274 true Chr18: 691244-697517 Glycine max
Glyma.18G009700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 695518-697517 Glycine max
Glyma.18G009700 2.0kb downstream 2.0kb downstream 6274 true Chr18: 689244-695517 Glycine max
Glyma.18G009700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 689244-691243 Glycine max
Glyma.18G009700 5.0kb upstream 5.0kb upstream 9274 true Chr18: 691244-700517 Glycine max
Glyma.18G009700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 695518-700517 Glycine max
Glyma.18G009700 5.0kb downstream 5.0kb downstream 9274 true Chr18: 686244-695517 Glycine max
Glyma.18G009700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 686244-691243 Glycine max
Glyma.18G009700 10.0kb upstream 10.0kb upstream 14274 true Chr18: 691244-705517 Glycine max
Glyma.18G009700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 695518-705517 Glycine max
Glyma.18G009700 10.0kb downstream 10.0kb downstream 14274 true Chr18: 681244-695517 Glycine max
Glyma.18G009700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 681244-691243 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314378 5265 Fabidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 217.522 0.0 1805.35 High  
cufflinks 44.4913 0.0 151.541 High  
cufflinks 13.9456 0.0 44.6906   Low
cufflinks 77.6512 0.0 424.098 High  
cufflinks 201.112 0.0 1580.26 High  
cufflinks 93.1331 0.0 502.641 High  
cufflinks 168.866 0.0 1214.38 High  
cufflinks 105.885 0.0 478.956 High  
cufflinks 324.255 0.0 3530.35 High High
cufflinks 12.569     High  
cufflinks 120.731     High High
cufflinks 3.726        
cufflinks 31.317     High  
cufflinks 63.958     High  
cufflinks 52.241     High  
cufflinks 1.655        
cufflinks 67.763     High  
cufflinks 2.466        
cufflinks 7.12        
cufflinks 0.548       Low
cufflinks 231.669     High High
cufflinks 0.815       Low
cufflinks 0.894       Low
cufflinks 100.954     High High
cufflinks 0.996       Low
cufflinks 157.015     High High

0 Strain