Gene : Glyma.18G009900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11842:SF11 - MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A Genomic Order:  99
Name:  ? Glyma.18G009900 Secondary Identifier:  ? PAC:30554320
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G009900 0.5kb upstream 0.5kb upstream 2943 true Chr18: 705490-708432 Glycine max
Glyma.18G009900 0.5kb upstream 0.5kb upstream 500 false Chr18: 705490-705989 Glycine max
Glyma.18G009900 0.5kb downstream 0.5kb downstream 2943 true Chr18: 705990-708932 Glycine max
Glyma.18G009900 0.5kb downstream 0.5kb downstream 500 false Chr18: 708433-708932 Glycine max
Glyma.18G009900 1.0kb upstream 1.0kb upstream 3443 true Chr18: 704990-708432 Glycine max
Glyma.18G009900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 704990-705989 Glycine max
Glyma.18G009900 1.0kb downstream 1.0kb downstream 3443 true Chr18: 705990-709432 Glycine max
Glyma.18G009900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 708433-709432 Glycine max
Glyma.18G009900 2.0kb upstream 2.0kb upstream 4443 true Chr18: 703990-708432 Glycine max
Glyma.18G009900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 703990-705989 Glycine max
Glyma.18G009900 2.0kb downstream 2.0kb downstream 4443 true Chr18: 705990-710432 Glycine max
Glyma.18G009900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 708433-710432 Glycine max
Glyma.18G009900 5.0kb upstream 5.0kb upstream 7443 true Chr18: 700990-708432 Glycine max
Glyma.18G009900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 700990-705989 Glycine max
Glyma.18G009900 5.0kb downstream 5.0kb downstream 7443 true Chr18: 705990-713432 Glycine max
Glyma.18G009900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 708433-713432 Glycine max
Glyma.18G009900 10.0kb upstream 10.0kb upstream 12443 true Chr18: 695990-708432 Glycine max
Glyma.18G009900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 695990-705989 Glycine max
Glyma.18G009900 10.0kb downstream 10.0kb downstream 12443 true Chr18: 705990-718432 Glycine max
Glyma.18G009900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 708433-718432 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304099 5265 Fabidae View MSA
124063049 5270 Rosid View MSA
123747176 5271 Pentapetalae View MSA
122787361 5272 Eudicot View MSA
122047880 5273 Angiosperm View MSA
121344125 5274 Embryophyte View MSA
123424567 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.103267 0.0 0.413412 Low Low
cufflinks 7.69634 0.0 21.9961   High
cufflinks 1.06291 0.0 3.82726    
cufflinks 1.64412 0.0 5.73117    
cufflinks 3.87007 0.0 12.1716    
cufflinks 2.9361 0.0 9.58797    
cufflinks 2.66041 0.0 8.81822    
cufflinks 2.83694 0.0 9.26951    
cufflinks 3.80467 0.0 11.9519    
cufflinks 2.111        
cufflinks 0.522       Low
cufflinks 1.413        
cufflinks 3.509        
cufflinks 3.89        
cufflinks 0.141       Low
cufflinks 4.038        
cufflinks 1.246        
cufflinks 1.063        
cufflinks 4.814       High
cufflinks 3.492        
cufflinks 0.827        
cufflinks 3.994        
cufflinks 4.696       High
cufflinks 0.468       Low
cufflinks 3.318        
cufflinks 1.447        

0 Strain