Gene : Glyma.18G010400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10257:SF26 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B' DELTA ISOFORM Genomic Order:  104
Name:  ? Glyma.18G010400 Secondary Identifier:  ? PAC:30557173
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G010400 0.5kb upstream 0.5kb upstream 4820 true Chr18: 738954-743773 Glycine max
Glyma.18G010400 0.5kb upstream 0.5kb upstream 500 false Chr18: 738954-739453 Glycine max
Glyma.18G010400 0.5kb downstream 0.5kb downstream 4820 true Chr18: 739454-744273 Glycine max
Glyma.18G010400 0.5kb downstream 0.5kb downstream 500 false Chr18: 743774-744273 Glycine max
Glyma.18G010400 1.0kb upstream 1.0kb upstream 5320 true Chr18: 738454-743773 Glycine max
Glyma.18G010400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 738454-739453 Glycine max
Glyma.18G010400 1.0kb downstream 1.0kb downstream 5320 true Chr18: 739454-744773 Glycine max
Glyma.18G010400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 743774-744773 Glycine max
Glyma.18G010400 2.0kb upstream 2.0kb upstream 6320 true Chr18: 737454-743773 Glycine max
Glyma.18G010400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 737454-739453 Glycine max
Glyma.18G010400 2.0kb downstream 2.0kb downstream 6320 true Chr18: 739454-745773 Glycine max
Glyma.18G010400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 743774-745773 Glycine max
Glyma.18G010400 5.0kb upstream 5.0kb upstream 9320 true Chr18: 734454-743773 Glycine max
Glyma.18G010400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 734454-739453 Glycine max
Glyma.18G010400 5.0kb downstream 5.0kb downstream 9320 true Chr18: 739454-748773 Glycine max
Glyma.18G010400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 743774-748773 Glycine max
Glyma.18G010400 10.0kb upstream 10.0kb upstream 14320 true Chr18: 729454-743773 Glycine max
Glyma.18G010400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 729454-739453 Glycine max
Glyma.18G010400 10.0kb downstream 10.0kb downstream 14320 true Chr18: 739454-753773 Glycine max
Glyma.18G010400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 743774-753773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304228 5265 Fabidae View MSA
124065822 5270 Rosid View MSA
123746976 5271 Pentapetalae View MSA
122787217 5272 Eudicot View MSA
122044522 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.02416 0.0 21.684    
cufflinks 3.80182 0.0 10.9702   Low
cufflinks 5.3597 0.0 14.8809    
cufflinks 5.20367 0.0 14.5026    
cufflinks 6.78337 0.0 18.5179    
cufflinks 24.8957 0.0 67.8444 High High
cufflinks 4.8529 0.0 13.6337    
cufflinks 7.32897 0.0 19.8849    
cufflinks 7.34824 0.0 19.9517    
cufflinks 5.659        
cufflinks 11.363     High  
cufflinks 3.214        
cufflinks 6.86        
cufflinks 3.898        
cufflinks 5.558     High  
cufflinks 2.671        
cufflinks 22.925     High High
cufflinks 3.086        
cufflinks 2.814        
cufflinks 2.083       Low
cufflinks 9.641     High  
cufflinks 2.91        
cufflinks 1.984       Low
cufflinks 15.083     High High
cufflinks 2.555        
cufflinks 21.328     High High

0 Strain