Gene : Glyma.18G011900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12428:SF18 - ALBINO3-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  119
Name:  ? Glyma.18G011900 Secondary Identifier:  ? PAC:30554843
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G011900 0.5kb upstream 0.5kb upstream 6163 true Chr18: 831476-837638 Glycine max
Glyma.18G011900 0.5kb upstream 0.5kb upstream 500 false Chr18: 831476-831975 Glycine max
Glyma.18G011900 0.5kb downstream 0.5kb downstream 6163 true Chr18: 831976-838138 Glycine max
Glyma.18G011900 0.5kb downstream 0.5kb downstream 500 false Chr18: 837639-838138 Glycine max
Glyma.18G011900 1.0kb upstream 1.0kb upstream 6663 true Chr18: 830976-837638 Glycine max
Glyma.18G011900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 830976-831975 Glycine max
Glyma.18G011900 1.0kb downstream 1.0kb downstream 6663 true Chr18: 831976-838638 Glycine max
Glyma.18G011900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 837639-838638 Glycine max
Glyma.18G011900 2.0kb upstream 2.0kb upstream 7663 true Chr18: 829976-837638 Glycine max
Glyma.18G011900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 829976-831975 Glycine max
Glyma.18G011900 2.0kb downstream 2.0kb downstream 7663 true Chr18: 831976-839638 Glycine max
Glyma.18G011900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 837639-839638 Glycine max
Glyma.18G011900 5.0kb upstream 5.0kb upstream 10663 true Chr18: 826976-837638 Glycine max
Glyma.18G011900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 826976-831975 Glycine max
Glyma.18G011900 5.0kb downstream 5.0kb downstream 10663 true Chr18: 831976-842638 Glycine max
Glyma.18G011900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 837639-842638 Glycine max
Glyma.18G011900 10.0kb upstream 10.0kb upstream 15663 true Chr18: 821976-837638 Glycine max
Glyma.18G011900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 821976-831975 Glycine max
Glyma.18G011900 10.0kb downstream 10.0kb downstream 15663 true Chr18: 831976-847638 Glycine max
Glyma.18G011900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 837639-847638 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304757 5265 Fabidae View MSA
124067959 5270 Rosid View MSA
123740459 5271 Pentapetalae View MSA
122792241 5272 Eudicot View MSA
122043512 5273 Angiosperm View MSA
121310140 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.58739 0.0 23.1772   High
cufflinks 3.33271 0.0 9.83745    
cufflinks 3.88134 0.0 11.2233    
cufflinks 2.05503 0.0 6.48256    
cufflinks 1.72728 0.0 5.58169    
cufflinks 1.27217 0.0 4.28036   Low
cufflinks 1.37652 0.0 4.59707    
cufflinks 2.82253 0.0 8.50829    
cufflinks 1.69537 0.0 5.49566    
cufflinks 0.712        
cufflinks 0.197       Low
cufflinks 1.555        
cufflinks 0.746        
cufflinks 0.581        
cufflinks 0.159       Low
cufflinks 2.156       High
cufflinks 0.518        
cufflinks 1.212        
cufflinks 1.415        
cufflinks 1.788        
cufflinks 0.197       Low
cufflinks 2.073        
cufflinks 4.088       High
cufflinks 0.201       Low
cufflinks 2.264       High
cufflinks 0.341        

0 Strain