Gene : Glyma.18G012600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR24012:SF415 - F12A21.10-RELATED Genomic Order:  126
Name:  ? Glyma.18G012600 Secondary Identifier:  ? PAC:30556170
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G012600 0.5kb upstream 0.5kb upstream 3984 true Chr18: 894167-898150 Glycine max
Glyma.18G012600 0.5kb upstream 0.5kb upstream 500 false Chr18: 894167-894666 Glycine max
Glyma.18G012600 0.5kb downstream 0.5kb downstream 3984 true Chr18: 894667-898650 Glycine max
Glyma.18G012600 0.5kb downstream 0.5kb downstream 500 false Chr18: 898151-898650 Glycine max
Glyma.18G012600 1.0kb upstream 1.0kb upstream 4484 true Chr18: 893667-898150 Glycine max
Glyma.18G012600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 893667-894666 Glycine max
Glyma.18G012600 1.0kb downstream 1.0kb downstream 4484 true Chr18: 894667-899150 Glycine max
Glyma.18G012600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 898151-899150 Glycine max
Glyma.18G012600 2.0kb upstream 2.0kb upstream 5484 true Chr18: 892667-898150 Glycine max
Glyma.18G012600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 892667-894666 Glycine max
Glyma.18G012600 2.0kb downstream 2.0kb downstream 5484 true Chr18: 894667-900150 Glycine max
Glyma.18G012600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 898151-900150 Glycine max
Glyma.18G012600 5.0kb upstream 5.0kb upstream 8484 true Chr18: 889667-898150 Glycine max
Glyma.18G012600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 889667-894666 Glycine max
Glyma.18G012600 5.0kb downstream 5.0kb downstream 8484 true Chr18: 894667-903150 Glycine max
Glyma.18G012600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 898151-903150 Glycine max
Glyma.18G012600 10.0kb upstream 10.0kb upstream 13484 true Chr18: 884667-898150 Glycine max
Glyma.18G012600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 884667-894666 Glycine max
Glyma.18G012600 10.0kb downstream 10.0kb downstream 13484 true Chr18: 894667-908150 Glycine max
Glyma.18G012600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 898151-908150 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300992 5265 Fabidae View MSA
124070321 5270 Rosid View MSA
123745062 5271 Pentapetalae View MSA
122789647 5272 Eudicot View MSA
122044254 5273 Angiosperm View MSA
121348969 5274 Embryophyte View MSA
123381105 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0199541 0.0 0.0874273 Low Low
cufflinks 15.5087 0.0 53.1629   High
cufflinks 1.28022 0.0 5.062    
cufflinks 2.16599 0.0 9.9104    
cufflinks 3.44111 0.0 15.031    
cufflinks 0.483934 0.0 2.23771    
cufflinks 4.10323 0.0 17.3172    
cufflinks 0.911755 0.0 5.17086    
cufflinks 0.545448 0.0 2.44674    
cufflinks 0.136        
cufflinks 0.008     Low Low
cufflinks 0.84       High
cufflinks 0.359        
cufflinks 0.573        
cufflinks 0.003     Low Low
cufflinks 0.185        
cufflinks 0.032     Low  
cufflinks 0.492        
cufflinks 4.539       High
cufflinks 0.081     Low  
cufflinks 0.022     Low  
cufflinks 0.1        
cufflinks 0.283        
cufflinks 0.011     Low Low
cufflinks 0.114        
cufflinks 0.066     Low  

0 Strain