Gene : Glyma.18G000200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR22763:SF59 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRP15 Genomic Order:  2
Name:  ? Glyma.18G000200 Secondary Identifier:  ? PAC:30556338
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G000200 0.5kb upstream 0.5kb upstream 2917 true Chr18: 47154-50070 Glycine max
Glyma.18G000200 0.5kb upstream 0.5kb upstream 500 false Chr18: 49571-50070 Glycine max
Glyma.18G000200 0.5kb downstream 0.5kb downstream 2917 true Chr18: 46654-49570 Glycine max
Glyma.18G000200 0.5kb downstream 0.5kb downstream 500 false Chr18: 46654-47153 Glycine max
Glyma.18G000200 1.0kb upstream 1.0kb upstream 3417 true Chr18: 47154-50570 Glycine max
Glyma.18G000200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 49571-50570 Glycine max
Glyma.18G000200 1.0kb downstream 1.0kb downstream 3417 true Chr18: 46154-49570 Glycine max
Glyma.18G000200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 46154-47153 Glycine max
Glyma.18G000200 2.0kb upstream 2.0kb upstream 4417 true Chr18: 47154-51570 Glycine max
Glyma.18G000200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 49571-51570 Glycine max
Glyma.18G000200 2.0kb downstream 2.0kb downstream 4417 true Chr18: 45154-49570 Glycine max
Glyma.18G000200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 45154-47153 Glycine max
Glyma.18G000200 5.0kb upstream 5.0kb upstream 7417 true Chr18: 47154-54570 Glycine max
Glyma.18G000200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 49571-54570 Glycine max
Glyma.18G000200 5.0kb downstream 5.0kb downstream 7417 true Chr18: 42154-49570 Glycine max
Glyma.18G000200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 42154-47153 Glycine max
Glyma.18G000200 10.0kb upstream 10.0kb upstream 12417 true Chr18: 47154-59570 Glycine max
Glyma.18G000200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 49571-59570 Glycine max
Glyma.18G000200 10.0kb downstream 10.0kb downstream 12417 true Chr18: 37154-49570 Glycine max
Glyma.18G000200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 37154-47153 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309509 5265 Fabidae View MSA
124061654 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0092 0.0 65.6371    
cufflinks 10.3587 0.0 41.3906   Low
cufflinks 18.9818 0.0 72.4116   High
cufflinks 12.9525 0.0 49.9714    
cufflinks 10.8719 0.0 43.2681    
cufflinks 18.1977 0.0 63.9913   High
cufflinks 11.9867 0.0 46.8973    
cufflinks 10.8327 0.0 42.7578    
cufflinks 14.7123 0.0 51.987    
cufflinks 2.114       Low
cufflinks 5.82     High High
cufflinks 3.747        
cufflinks 1.685       Low
cufflinks 1.406       Low
cufflinks 3.938        
cufflinks 3.029        
cufflinks 4.405        
cufflinks 2.989        
cufflinks 2.265        
cufflinks 3.981        
cufflinks 4.247        
cufflinks 3.906        
cufflinks 2.489        
cufflinks 4.8       High
cufflinks 3.331        
cufflinks 4.224        

0 Strain