Gene : Glyma.18G000400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31250:SF4 - CALMODULIN-BINDING FAMILY PROTEIN-RELATED Genomic Order:  4
Name:  ? Glyma.18G000400 Secondary Identifier:  ? PAC:30557032
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G000400 0.5kb upstream 0.5kb upstream 3096 true Chr18: 58631-61726 Glycine max
Glyma.18G000400 0.5kb upstream 0.5kb upstream 500 false Chr18: 61227-61726 Glycine max
Glyma.18G000400 0.5kb downstream 0.5kb downstream 3096 true Chr18: 58131-61226 Glycine max
Glyma.18G000400 0.5kb downstream 0.5kb downstream 500 false Chr18: 58131-58630 Glycine max
Glyma.18G000400 1.0kb upstream 1.0kb upstream 3596 true Chr18: 58631-62226 Glycine max
Glyma.18G000400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 61227-62226 Glycine max
Glyma.18G000400 1.0kb downstream 1.0kb downstream 3596 true Chr18: 57631-61226 Glycine max
Glyma.18G000400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57631-58630 Glycine max
Glyma.18G000400 2.0kb upstream 2.0kb upstream 4596 true Chr18: 58631-63226 Glycine max
Glyma.18G000400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 61227-63226 Glycine max
Glyma.18G000400 2.0kb downstream 2.0kb downstream 4596 true Chr18: 56631-61226 Glycine max
Glyma.18G000400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56631-58630 Glycine max
Glyma.18G000400 5.0kb upstream 5.0kb upstream 7596 true Chr18: 58631-66226 Glycine max
Glyma.18G000400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 61227-66226 Glycine max
Glyma.18G000400 5.0kb downstream 5.0kb downstream 7596 true Chr18: 53631-61226 Glycine max
Glyma.18G000400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53631-58630 Glycine max
Glyma.18G000400 10.0kb upstream 10.0kb upstream 12596 true Chr18: 58631-71226 Glycine max
Glyma.18G000400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 61227-71226 Glycine max
Glyma.18G000400 10.0kb downstream 10.0kb downstream 12596 true Chr18: 48631-61226 Glycine max
Glyma.18G000400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 48631-58630 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300580 5265 Fabidae View MSA
124062345 5270 Rosid View MSA
123742026 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0388549 0.0 0.158288 Low  
cufflinks 0.0747285 0.0 0.296341 Low  
cufflinks 0.0938705 0.0 0.36873 Low  
cufflinks 0.0514727 0.0 0.206852 Low  
cufflinks 0.182358 0.0 0.698513 Low  
cufflinks 0.18163 0.0 0.695787 Low  
cufflinks 0.00853187 0.0 0.0390777 Low Low
cufflinks 0.0372773 0.0 0.151921 Low  
cufflinks 0.355119 0.0 1.31881   High
cufflinks 0.297        
cufflinks 5.544     High High
cufflinks 0.089     Low Low
cufflinks 0.472        
cufflinks 0.246        
cufflinks 1.186        
cufflinks 0.189        
cufflinks 0.26        
cufflinks 0.32        
cufflinks 0.061     Low Low
cufflinks 0.245        
cufflinks 1.341        
cufflinks 0.206        
cufflinks 0.227        
cufflinks 2.774       High
cufflinks 0.158        
cufflinks 4.152       High

0 Strain