Gene : Glyma.18G001500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Genomic Order:  15
Name:  ? Glyma.18G001500 Secondary Identifier:  ? PAC:30557304
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G001500 0.5kb upstream 0.5kb upstream 6329 true Chr18: 138588-144916 Glycine max
Glyma.18G001500 0.5kb upstream 0.5kb upstream 500 false Chr18: 138588-139087 Glycine max
Glyma.18G001500 0.5kb downstream 0.5kb downstream 6329 true Chr18: 139088-145416 Glycine max
Glyma.18G001500 0.5kb downstream 0.5kb downstream 500 false Chr18: 144917-145416 Glycine max
Glyma.18G001500 1.0kb upstream 1.0kb upstream 6829 true Chr18: 138088-144916 Glycine max
Glyma.18G001500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 138088-139087 Glycine max
Glyma.18G001500 1.0kb downstream 1.0kb downstream 6829 true Chr18: 139088-145916 Glycine max
Glyma.18G001500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 144917-145916 Glycine max
Glyma.18G001500 2.0kb upstream 2.0kb upstream 7829 true Chr18: 137088-144916 Glycine max
Glyma.18G001500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 137088-139087 Glycine max
Glyma.18G001500 2.0kb downstream 2.0kb downstream 7829 true Chr18: 139088-146916 Glycine max
Glyma.18G001500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 144917-146916 Glycine max
Glyma.18G001500 5.0kb upstream 5.0kb upstream 10829 true Chr18: 134088-144916 Glycine max
Glyma.18G001500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 134088-139087 Glycine max
Glyma.18G001500 5.0kb downstream 5.0kb downstream 10829 true Chr18: 139088-149916 Glycine max
Glyma.18G001500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 144917-149916 Glycine max
Glyma.18G001500 10.0kb upstream 10.0kb upstream 15829 true Chr18: 129088-144916 Glycine max
Glyma.18G001500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 129088-139087 Glycine max
Glyma.18G001500 10.0kb downstream 10.0kb downstream 15829 true Chr18: 139088-154916 Glycine max
Glyma.18G001500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 144917-154916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297611 5265 Fabidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.558 0.0 26.3752   High
cufflinks 2.56399 0.0 14.7978    
cufflinks 5.39582 0.0 22.8337    
cufflinks 2.8459 0.0 15.3664    
cufflinks 3.07763 0.0 15.9032    
cufflinks 2.57868 0.0 14.0509    
cufflinks 7.13354 0.0 28.1858   High
cufflinks 2.7597 0.0 14.6907    
cufflinks 2.89857 0.0 15.2258    
cufflinks 0.105       Low
cufflinks 0.168       Low
cufflinks 0.67       High
cufflinks 0.278        
cufflinks 0.224        
cufflinks 0.344        
cufflinks 0.472        
cufflinks 0.322        
cufflinks 0.64       High
cufflinks 0.477        
cufflinks 0.58        
cufflinks 0.26        
cufflinks 0.662       High
cufflinks 0.565        
cufflinks 0.263        
cufflinks 0.602        
cufflinks 0.242        

0 Strain