Gene : Glyma.18G051500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31194//PTHR31194:SF6 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  515
Name:  ? Glyma.18G051500 Secondary Identifier:  ? PAC:30556605
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G051500 0.5kb upstream 0.5kb upstream 1318 true Chr18: 4440664-4441981 Glycine max
Glyma.18G051500 0.5kb upstream 0.5kb upstream 500 false Chr18: 4440664-4441163 Glycine max
Glyma.18G051500 0.5kb downstream 0.5kb downstream 1318 true Chr18: 4441164-4442481 Glycine max
Glyma.18G051500 0.5kb downstream 0.5kb downstream 500 false Chr18: 4441982-4442481 Glycine max
Glyma.18G051500 1.0kb upstream 1.0kb upstream 1818 true Chr18: 4440164-4441981 Glycine max
Glyma.18G051500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4440164-4441163 Glycine max
Glyma.18G051500 1.0kb downstream 1.0kb downstream 1818 true Chr18: 4441164-4442981 Glycine max
Glyma.18G051500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4441982-4442981 Glycine max
Glyma.18G051500 2.0kb upstream 2.0kb upstream 2818 true Chr18: 4439164-4441981 Glycine max
Glyma.18G051500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4439164-4441163 Glycine max
Glyma.18G051500 2.0kb downstream 2.0kb downstream 2818 true Chr18: 4441164-4443981 Glycine max
Glyma.18G051500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4441982-4443981 Glycine max
Glyma.18G051500 5.0kb upstream 5.0kb upstream 5818 true Chr18: 4436164-4441981 Glycine max
Glyma.18G051500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4436164-4441163 Glycine max
Glyma.18G051500 5.0kb downstream 5.0kb downstream 5818 true Chr18: 4441164-4446981 Glycine max
Glyma.18G051500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4441982-4446981 Glycine max
Glyma.18G051500 10.0kb upstream 10.0kb upstream 10818 true Chr18: 4431164-4441981 Glycine max
Glyma.18G051500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4431164-4441163 Glycine max
Glyma.18G051500 10.0kb downstream 10.0kb downstream 10818 true Chr18: 4441164-4451981 Glycine max
Glyma.18G051500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4441982-4451981 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296641 5265 Fabidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.70547 0.0 24.2954   High
cufflinks 6.92733 0.0 22.3925   High
cufflinks 5.85843 0.0 19.6738    
cufflinks 3.25291 0.0 11.4415    
cufflinks 1.74363 0.0 6.34035    
cufflinks 0.772076 0.0 2.93423   Low
cufflinks 0.592467 0.0 2.27581   Low
cufflinks 2.61779 0.0 9.3481    
cufflinks 0.814793 0.0 3.09284   Low
cufflinks 7.936     High  
cufflinks 0.9       Low
cufflinks 13.076     High High
cufflinks 1.682        
cufflinks 1.547        
cufflinks 0.661       Low
cufflinks 4.189        
cufflinks 2.277        
cufflinks 17.016     High High
cufflinks 8.532     High High
cufflinks 2.868        
cufflinks 0.954       Low
cufflinks 4.85        
cufflinks 7.173        
cufflinks 1.462        
cufflinks 3.159        
cufflinks 0.977       Low

0 Strain