Gene : Glyma.18G052500 G. max Wm82.a2.v1
Defline:  (1 of 128) PF00170 - bZIP transcription factor (bZIP_1) Genomic Order:  525
Name:  ? Glyma.18G052500 Secondary Identifier:  ? PAC:30554647
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G052500 0.5kb upstream 0.5kb upstream 3781 true Chr18: 4545548-4549328 Glycine max
Glyma.18G052500 0.5kb upstream 0.5kb upstream 500 false Chr18: 4545548-4546047 Glycine max
Glyma.18G052500 0.5kb downstream 0.5kb downstream 3781 true Chr18: 4546048-4549828 Glycine max
Glyma.18G052500 0.5kb downstream 0.5kb downstream 500 false Chr18: 4549329-4549828 Glycine max
Glyma.18G052500 1.0kb upstream 1.0kb upstream 4281 true Chr18: 4545048-4549328 Glycine max
Glyma.18G052500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4545048-4546047 Glycine max
Glyma.18G052500 1.0kb downstream 1.0kb downstream 4281 true Chr18: 4546048-4550328 Glycine max
Glyma.18G052500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4549329-4550328 Glycine max
Glyma.18G052500 2.0kb upstream 2.0kb upstream 5281 true Chr18: 4544048-4549328 Glycine max
Glyma.18G052500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4544048-4546047 Glycine max
Glyma.18G052500 2.0kb downstream 2.0kb downstream 5281 true Chr18: 4546048-4551328 Glycine max
Glyma.18G052500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4549329-4551328 Glycine max
Glyma.18G052500 5.0kb upstream 5.0kb upstream 8281 true Chr18: 4541048-4549328 Glycine max
Glyma.18G052500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4541048-4546047 Glycine max
Glyma.18G052500 5.0kb downstream 5.0kb downstream 8281 true Chr18: 4546048-4554328 Glycine max
Glyma.18G052500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4549329-4554328 Glycine max
Glyma.18G052500 10.0kb upstream 10.0kb upstream 13281 true Chr18: 4536048-4549328 Glycine max
Glyma.18G052500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4536048-4546047 Glycine max
Glyma.18G052500 10.0kb downstream 10.0kb downstream 13281 true Chr18: 4546048-4559328 Glycine max
Glyma.18G052500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4549329-4559328 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314195 5265 Fabidae View MSA
124064643 5270 Rosid View MSA
123746615 5271 Pentapetalae View MSA
122797206 5272 Eudicot View MSA
122046720 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310646 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.388132 0.0 1.45148   Low
cufflinks 3.54964 0.0 10.7932    
cufflinks 1.04559 0.0 3.70078   Low
cufflinks 2.95382 0.0 9.2102    
cufflinks 5.7455 0.0 16.2555    
cufflinks 8.13196 0.0 22.3616   High
cufflinks 2.33908 0.0 7.49702    
cufflinks 8.00588 0.0 22.0712    
cufflinks 4.97931 0.0 14.3975    
cufflinks 2.456       High
cufflinks 1.058        
cufflinks 0.913        
cufflinks 3.101       High
cufflinks 3.91       High
cufflinks 0.342       Low
cufflinks 1.268        
cufflinks 1.272        
cufflinks 0.908        
cufflinks 1.324        
cufflinks 1.064        
cufflinks 0.735        
cufflinks 1.183        
cufflinks 1.213        
cufflinks 0.686        
cufflinks 0.713        
cufflinks 1.398        

0 Strain