Gene : Glyma.18G052700 G. max Wm82.a2.v1
Defline:  (1 of 31) PTHR21717 - TELOMERIC REPEAT BINDING PROTEIN Genomic Order:  527
Name:  ? Glyma.18G052700 Secondary Identifier:  ? PAC:30556131
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G052700 0.5kb upstream 0.5kb upstream 6098 true Chr18: 4562472-4568569 Glycine max
Glyma.18G052700 0.5kb upstream 0.5kb upstream 500 false Chr18: 4568070-4568569 Glycine max
Glyma.18G052700 0.5kb downstream 0.5kb downstream 6098 true Chr18: 4561972-4568069 Glycine max
Glyma.18G052700 0.5kb downstream 0.5kb downstream 500 false Chr18: 4561972-4562471 Glycine max
Glyma.18G052700 1.0kb upstream 1.0kb upstream 6598 true Chr18: 4562472-4569069 Glycine max
Glyma.18G052700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4568070-4569069 Glycine max
Glyma.18G052700 1.0kb downstream 1.0kb downstream 6598 true Chr18: 4561472-4568069 Glycine max
Glyma.18G052700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4561472-4562471 Glycine max
Glyma.18G052700 2.0kb upstream 2.0kb upstream 7598 true Chr18: 4562472-4570069 Glycine max
Glyma.18G052700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4568070-4570069 Glycine max
Glyma.18G052700 2.0kb downstream 2.0kb downstream 7598 true Chr18: 4560472-4568069 Glycine max
Glyma.18G052700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4560472-4562471 Glycine max
Glyma.18G052700 5.0kb upstream 5.0kb upstream 10598 true Chr18: 4562472-4573069 Glycine max
Glyma.18G052700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4568070-4573069 Glycine max
Glyma.18G052700 5.0kb downstream 5.0kb downstream 10598 true Chr18: 4557472-4568069 Glycine max
Glyma.18G052700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4557472-4562471 Glycine max
Glyma.18G052700 10.0kb upstream 10.0kb upstream 15598 true Chr18: 4562472-4578069 Glycine max
Glyma.18G052700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4568070-4578069 Glycine max
Glyma.18G052700 10.0kb downstream 10.0kb downstream 15598 true Chr18: 4552472-4568069 Glycine max
Glyma.18G052700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4552472-4562471 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314491 5265 Fabidae View MSA
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.19793 0.0 21.3116    
cufflinks 4.36063 0.0 19.061    
cufflinks 5.42681 0.0 16.9793    
cufflinks 4.1247 0.0 13.645    
cufflinks 3.40999 0.0 15.7551    
cufflinks 2.5942 0.0 13.2328   Low
cufflinks 6.16012 0.0 27.0147   High
cufflinks 4.3265 0.0 18.7706    
cufflinks 3.79016 0.0 17.2383    
cufflinks 0.481       Low
cufflinks 0.865        
cufflinks 0.963        
cufflinks 0.573       Low
cufflinks 0.588       Low
cufflinks 1.019        
cufflinks 1.178        
cufflinks 0.472       Low
cufflinks 0.781        
cufflinks 1.134        
cufflinks 1.213        
cufflinks 0.875        
cufflinks 1.389       High
cufflinks 1.047        
cufflinks 1.094        
cufflinks 1.278       High
cufflinks 0.894        

0 Strain