Gene : Glyma.18G053700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11851:SF123 - NARDILYSIN Genomic Order:  537
Name:  ? Glyma.18G053700 Secondary Identifier:  ? PAC:30555960
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G053700 0.5kb upstream 0.5kb upstream 12164 true Chr18: 4646238-4658401 Glycine max
Glyma.18G053700 0.5kb upstream 0.5kb upstream 500 false Chr18: 4646238-4646737 Glycine max
Glyma.18G053700 0.5kb downstream 0.5kb downstream 12164 true Chr18: 4646738-4658901 Glycine max
Glyma.18G053700 0.5kb downstream 0.5kb downstream 500 false Chr18: 4658402-4658901 Glycine max
Glyma.18G053700 1.0kb upstream 1.0kb upstream 12664 true Chr18: 4645738-4658401 Glycine max
Glyma.18G053700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4645738-4646737 Glycine max
Glyma.18G053700 1.0kb downstream 1.0kb downstream 12664 true Chr18: 4646738-4659401 Glycine max
Glyma.18G053700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4658402-4659401 Glycine max
Glyma.18G053700 2.0kb upstream 2.0kb upstream 13664 true Chr18: 4644738-4658401 Glycine max
Glyma.18G053700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4644738-4646737 Glycine max
Glyma.18G053700 2.0kb downstream 2.0kb downstream 13664 true Chr18: 4646738-4660401 Glycine max
Glyma.18G053700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4658402-4660401 Glycine max
Glyma.18G053700 5.0kb upstream 5.0kb upstream 16664 true Chr18: 4641738-4658401 Glycine max
Glyma.18G053700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4641738-4646737 Glycine max
Glyma.18G053700 5.0kb downstream 5.0kb downstream 16664 true Chr18: 4646738-4663401 Glycine max
Glyma.18G053700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4658402-4663401 Glycine max
Glyma.18G053700 10.0kb upstream 10.0kb upstream 21664 true Chr18: 4636738-4658401 Glycine max
Glyma.18G053700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4636738-4646737 Glycine max
Glyma.18G053700 10.0kb downstream 10.0kb downstream 21664 true Chr18: 4646738-4668401 Glycine max
Glyma.18G053700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4658402-4668401 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300792 5265 Fabidae View MSA
124061492 5270 Rosid View MSA
123738387 5271 Pentapetalae View MSA
122790757 5272 Eudicot View MSA
122043199 5273 Angiosperm View MSA
121346552 5274 Embryophyte View MSA
123428383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1334 0.0 27.1032   High
cufflinks 6.28696 0.0 16.8231    
cufflinks 6.19304 0.0 16.5687    
cufflinks 6.64186 0.0 17.7492    
cufflinks 10.2464 0.0 27.4063   High
cufflinks 5.82054 0.0 15.6126    
cufflinks 6.04238 0.0 16.2012    
cufflinks 6.6421 0.0 17.7498    
cufflinks 6.78774 0.0 18.135    
cufflinks 3.372        
cufflinks 2.18        
cufflinks 2.902        
cufflinks 5.405       High
cufflinks 6.871     High High
cufflinks 2.125       Low
cufflinks 3.804        
cufflinks 1.583       Low
cufflinks 3.335        
cufflinks 3.926        
cufflinks 3.68        
cufflinks 2.295        
cufflinks 3.562        
cufflinks 3.4        
cufflinks 2.221        
cufflinks 3.656        
cufflinks 2.419        

0 Strain