Gene : Glyma.18G054000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  540
Name:  ? Glyma.18G054000 Secondary Identifier:  ? PAC:30555882
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G054000 0.5kb upstream 0.5kb upstream 3297 true Chr18: 4683212-4686508 Glycine max
Glyma.18G054000 0.5kb upstream 0.5kb upstream 500 false Chr18: 4683212-4683711 Glycine max
Glyma.18G054000 0.5kb downstream 0.5kb downstream 3297 true Chr18: 4683712-4687008 Glycine max
Glyma.18G054000 0.5kb downstream 0.5kb downstream 500 false Chr18: 4686509-4687008 Glycine max
Glyma.18G054000 1.0kb upstream 1.0kb upstream 3797 true Chr18: 4682712-4686508 Glycine max
Glyma.18G054000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4682712-4683711 Glycine max
Glyma.18G054000 1.0kb downstream 1.0kb downstream 3797 true Chr18: 4683712-4687508 Glycine max
Glyma.18G054000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4686509-4687508 Glycine max
Glyma.18G054000 2.0kb upstream 2.0kb upstream 4797 true Chr18: 4681712-4686508 Glycine max
Glyma.18G054000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4681712-4683711 Glycine max
Glyma.18G054000 2.0kb downstream 2.0kb downstream 4797 true Chr18: 4683712-4688508 Glycine max
Glyma.18G054000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4686509-4688508 Glycine max
Glyma.18G054000 5.0kb upstream 5.0kb upstream 7797 true Chr18: 4678712-4686508 Glycine max
Glyma.18G054000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4678712-4683711 Glycine max
Glyma.18G054000 5.0kb downstream 5.0kb downstream 7797 true Chr18: 4683712-4691508 Glycine max
Glyma.18G054000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4686509-4691508 Glycine max
Glyma.18G054000 10.0kb upstream 10.0kb upstream 12797 true Chr18: 4673712-4686508 Glycine max
Glyma.18G054000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4673712-4683711 Glycine max
Glyma.18G054000 10.0kb downstream 10.0kb downstream 12797 true Chr18: 4683712-4696508 Glycine max
Glyma.18G054000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4686509-4696508 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310468 5265 Fabidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.61551 0.0 26.9849    
cufflinks 208.828 0.0 700.427 High High
cufflinks 40.7769 0.0 109.978 High  
cufflinks 31.2764 0.0 83.5862 High  
cufflinks 50.4113 0.0 137.612 High  
cufflinks 74.0859 0.0 209.923 High  
cufflinks 1.4222 0.0 5.03145   Low
cufflinks 30.5576 0.0 81.6447 High  
cufflinks 12.4755 0.0 34.2036    
cufflinks 76.265     High  
cufflinks 1.22       Low
cufflinks 19.966     High  
cufflinks 38.611     High  
cufflinks 31.982     High  
cufflinks 0.179       Low
cufflinks 49.767     High  
cufflinks 1.27       Low
cufflinks 72.916     High  
cufflinks 148.965     High High
cufflinks 22.872     High  
cufflinks 2.128        
cufflinks 36.102     High  
cufflinks 35.918     High  
cufflinks 0.778       Low
cufflinks 46.81     High  
cufflinks 4.529        

0 Strain