Gene : Glyma.18G055200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23315:SF7 - U-BOX DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  552
Name:  ? Glyma.18G055200 Secondary Identifier:  ? PAC:30556205
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G055200 0.5kb upstream 0.5kb upstream 8326 true Chr18: 4794823-4803148 Glycine max
Glyma.18G055200 0.5kb upstream 0.5kb upstream 500 false Chr18: 4794823-4795322 Glycine max
Glyma.18G055200 0.5kb downstream 0.5kb downstream 8326 true Chr18: 4795323-4803648 Glycine max
Glyma.18G055200 0.5kb downstream 0.5kb downstream 500 false Chr18: 4803149-4803648 Glycine max
Glyma.18G055200 1.0kb upstream 1.0kb upstream 8826 true Chr18: 4794323-4803148 Glycine max
Glyma.18G055200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4794323-4795322 Glycine max
Glyma.18G055200 1.0kb downstream 1.0kb downstream 8826 true Chr18: 4795323-4804148 Glycine max
Glyma.18G055200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4803149-4804148 Glycine max
Glyma.18G055200 2.0kb upstream 2.0kb upstream 9826 true Chr18: 4793323-4803148 Glycine max
Glyma.18G055200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4793323-4795322 Glycine max
Glyma.18G055200 2.0kb downstream 2.0kb downstream 9826 true Chr18: 4795323-4805148 Glycine max
Glyma.18G055200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4803149-4805148 Glycine max
Glyma.18G055200 5.0kb upstream 5.0kb upstream 12826 true Chr18: 4790323-4803148 Glycine max
Glyma.18G055200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4790323-4795322 Glycine max
Glyma.18G055200 5.0kb downstream 5.0kb downstream 12826 true Chr18: 4795323-4808148 Glycine max
Glyma.18G055200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4803149-4808148 Glycine max
Glyma.18G055200 10.0kb upstream 10.0kb upstream 17826 true Chr18: 4785323-4803148 Glycine max
Glyma.18G055200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4785323-4795322 Glycine max
Glyma.18G055200 10.0kb downstream 10.0kb downstream 17826 true Chr18: 4795323-4813148 Glycine max
Glyma.18G055200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4803149-4813148 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308370 5265 Fabidae View MSA
124065009 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0925 0.0 32.4423    
cufflinks 6.86403 0.0 18.3668   Low
cufflinks 17.3259 0.0 47.514   High
cufflinks 10.0328 0.0 26.799    
cufflinks 12.0414 0.0 32.2975    
cufflinks 16.0458 0.0 43.6917   High
cufflinks 11.4258 0.0 30.5941    
cufflinks 9.46759 0.0 25.2712    
cufflinks 14.3029 0.0 38.6621    
cufflinks 3.403       Low
cufflinks 10.596     High High
cufflinks 6.894        
cufflinks 4.36        
cufflinks 3.55       Low
cufflinks 8.982     High High
cufflinks 5.118        
cufflinks 6.492     High  
cufflinks 4.355        
cufflinks 3.691       Low
cufflinks 7.137     High  
cufflinks 7.561     High  
cufflinks 5.966        
cufflinks 3.4       Low
cufflinks 9.985     High High
cufflinks 5.681        
cufflinks 7.062     High  

0 Strain