Gene : Glyma.18G057700 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.3.1.39 - [Acyl-carrier-protein] S-malonyltransferase / MCAT Genomic Order:  577
Name:  ? Glyma.18G057700 Secondary Identifier:  ? PAC:30555589
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4381 Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-7388 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G057700 0.5kb upstream 0.5kb upstream 4624 true Chr18: 5085113-5089736 Glycine max
Glyma.18G057700 0.5kb upstream 0.5kb upstream 500 false Chr18: 5089237-5089736 Glycine max
Glyma.18G057700 0.5kb downstream 0.5kb downstream 4624 true Chr18: 5084613-5089236 Glycine max
Glyma.18G057700 0.5kb downstream 0.5kb downstream 500 false Chr18: 5084613-5085112 Glycine max
Glyma.18G057700 1.0kb upstream 1.0kb upstream 5124 true Chr18: 5085113-5090236 Glycine max
Glyma.18G057700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5089237-5090236 Glycine max
Glyma.18G057700 1.0kb downstream 1.0kb downstream 5124 true Chr18: 5084113-5089236 Glycine max
Glyma.18G057700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5084113-5085112 Glycine max
Glyma.18G057700 2.0kb upstream 2.0kb upstream 6124 true Chr18: 5085113-5091236 Glycine max
Glyma.18G057700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5089237-5091236 Glycine max
Glyma.18G057700 2.0kb downstream 2.0kb downstream 6124 true Chr18: 5083113-5089236 Glycine max
Glyma.18G057700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5083113-5085112 Glycine max
Glyma.18G057700 5.0kb upstream 5.0kb upstream 9124 true Chr18: 5085113-5094236 Glycine max
Glyma.18G057700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5089237-5094236 Glycine max
Glyma.18G057700 5.0kb downstream 5.0kb downstream 9124 true Chr18: 5080113-5089236 Glycine max
Glyma.18G057700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5080113-5085112 Glycine max
Glyma.18G057700 10.0kb upstream 10.0kb upstream 14124 true Chr18: 5085113-5099236 Glycine max
Glyma.18G057700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5089237-5099236 Glycine max
Glyma.18G057700 10.0kb downstream 10.0kb downstream 14124 true Chr18: 5075113-5089236 Glycine max
Glyma.18G057700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5075113-5085112 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041321 5273 Angiosperm View MSA
122308071 5265 Fabidae View MSA
124063933 5270 Rosid View MSA
123737538 5271 Pentapetalae View MSA
122786966 5272 Eudicot View MSA
121346030 5274 Embryophyte View MSA
123426767 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.8069 0.0 101.121 High  
cufflinks 37.9119 0.0 104.438 High  
cufflinks 10.2027 0.0 27.5864   Low
cufflinks 31.3587 0.0 85.2296 High  
cufflinks 42.261 0.0 117.541 High  
cufflinks 31.2405 0.0 84.8485 High  
cufflinks 71.4391 0.0 212.295 High High
cufflinks 27.2761 0.0 73.576 High  
cufflinks 26.654 0.0 71.8014 High  
cufflinks 12.952     High  
cufflinks 2.155       Low
cufflinks 8.303     High  
cufflinks 18.681     High  
cufflinks 26.039     High High
cufflinks 2.606       Low
cufflinks 17.384     High  
cufflinks 5.344        
cufflinks 15.977     High  
cufflinks 18.376     High  
cufflinks 11.019     High  
cufflinks 3.987       Low
cufflinks 12.062     High  
cufflinks 21.455     High High
cufflinks 4.365        
cufflinks 13.862     High  
cufflinks 4.999        

0 Strain