Gene : Glyma.18G043300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10593:SF36 - SERINE/THREONINE-PROTEIN KINASE RIO2 Genomic Order:  433
Name:  ? Glyma.18G043300 Secondary Identifier:  ? PAC:30558670
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G043300 0.5kb upstream 0.5kb upstream 9398 true Chr18: 3684008-3693405 Glycine max
Glyma.18G043300 0.5kb upstream 0.5kb upstream 500 false Chr18: 3692906-3693405 Glycine max
Glyma.18G043300 0.5kb downstream 0.5kb downstream 9398 true Chr18: 3683508-3692905 Glycine max
Glyma.18G043300 0.5kb downstream 0.5kb downstream 500 false Chr18: 3683508-3684007 Glycine max
Glyma.18G043300 1.0kb upstream 1.0kb upstream 9898 true Chr18: 3684008-3693905 Glycine max
Glyma.18G043300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3692906-3693905 Glycine max
Glyma.18G043300 1.0kb downstream 1.0kb downstream 9898 true Chr18: 3683008-3692905 Glycine max
Glyma.18G043300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3683008-3684007 Glycine max
Glyma.18G043300 2.0kb upstream 2.0kb upstream 10898 true Chr18: 3684008-3694905 Glycine max
Glyma.18G043300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3692906-3694905 Glycine max
Glyma.18G043300 2.0kb downstream 2.0kb downstream 10898 true Chr18: 3682008-3692905 Glycine max
Glyma.18G043300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3682008-3684007 Glycine max
Glyma.18G043300 5.0kb upstream 5.0kb upstream 13898 true Chr18: 3684008-3697905 Glycine max
Glyma.18G043300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3692906-3697905 Glycine max
Glyma.18G043300 5.0kb downstream 5.0kb downstream 13898 true Chr18: 3679008-3692905 Glycine max
Glyma.18G043300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3679008-3684007 Glycine max
Glyma.18G043300 10.0kb upstream 10.0kb upstream 18898 true Chr18: 3684008-3702905 Glycine max
Glyma.18G043300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3692906-3702905 Glycine max
Glyma.18G043300 10.0kb downstream 10.0kb downstream 18898 true Chr18: 3674008-3692905 Glycine max
Glyma.18G043300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3674008-3684007 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305770 5265 Fabidae View MSA
124060478 5270 Rosid View MSA
123743983 5271 Pentapetalae View MSA
122786408 5272 Eudicot View MSA
122045504 5273 Angiosperm View MSA
121346545 5274 Embryophyte View MSA
123428706 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7508 0.0 28.9995   High
cufflinks 6.52626 0.0 18.2363    
cufflinks 9.26397 0.0 25.1345   High
cufflinks 8.52427 0.0 23.2732    
cufflinks 6.64846 0.0 18.5607    
cufflinks 6.88392 0.0 19.1509    
cufflinks 5.8174 0.0 16.4905   Low
cufflinks 6.56144 0.0 18.3039    
cufflinks 8.35305 0.0 22.8614    
cufflinks 1.241       Low
cufflinks 1.812        
cufflinks 2.317       High
cufflinks 1.978        
cufflinks 2.218        
cufflinks 1.531       Low
cufflinks 1.815        
cufflinks 1.626        
cufflinks 2.262       High
cufflinks 1.95        
cufflinks 1.84        
cufflinks 2.113        
cufflinks 1.969        
cufflinks 2.154        
cufflinks 2.231        
cufflinks 1.928        
cufflinks 1.675        

0 Strain