Gene : Glyma.18G045600 G. max Wm82.a2.v1
Defline:  (1 of 2) PF13087//PF13245 - AAA domain (AAA_12) // Part of AAA domain (AAA_19) Genomic Order:  456
Name:  ? Glyma.18G045600 Secondary Identifier:  ? PAC:30556491
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G045600 0.5kb upstream 0.5kb upstream 5845 true Chr18: 3946697-3952541 Glycine max
Glyma.18G045600 0.5kb upstream 0.5kb upstream 500 false Chr18: 3946697-3947196 Glycine max
Glyma.18G045600 0.5kb downstream 0.5kb downstream 5845 true Chr18: 3947197-3953041 Glycine max
Glyma.18G045600 0.5kb downstream 0.5kb downstream 500 false Chr18: 3952542-3953041 Glycine max
Glyma.18G045600 1.0kb upstream 1.0kb upstream 6345 true Chr18: 3946197-3952541 Glycine max
Glyma.18G045600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3946197-3947196 Glycine max
Glyma.18G045600 1.0kb downstream 1.0kb downstream 6345 true Chr18: 3947197-3953541 Glycine max
Glyma.18G045600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3952542-3953541 Glycine max
Glyma.18G045600 2.0kb upstream 2.0kb upstream 7345 true Chr18: 3945197-3952541 Glycine max
Glyma.18G045600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3945197-3947196 Glycine max
Glyma.18G045600 2.0kb downstream 2.0kb downstream 7345 true Chr18: 3947197-3954541 Glycine max
Glyma.18G045600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3952542-3954541 Glycine max
Glyma.18G045600 5.0kb upstream 5.0kb upstream 10345 true Chr18: 3942197-3952541 Glycine max
Glyma.18G045600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3942197-3947196 Glycine max
Glyma.18G045600 5.0kb downstream 5.0kb downstream 10345 true Chr18: 3947197-3957541 Glycine max
Glyma.18G045600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3952542-3957541 Glycine max
Glyma.18G045600 10.0kb upstream 10.0kb upstream 15345 true Chr18: 3937197-3952541 Glycine max
Glyma.18G045600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3937197-3947196 Glycine max
Glyma.18G045600 10.0kb downstream 10.0kb downstream 15345 true Chr18: 3947197-3962541 Glycine max
Glyma.18G045600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3952542-3962541 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314494 5265 Fabidae View MSA
124072227 5270 Rosid View MSA
123753543 5271 Pentapetalae View MSA
122797869 5272 Eudicot View MSA
122048393 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121348032 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.688098 0.0 3.71088    
cufflinks 1.56365 0.0 5.07993   High
cufflinks 0.871874 0.0 3.2847    
cufflinks 1.00394 0.0 3.65973    
cufflinks 0.703444 0.0 4.93554    
cufflinks 0.623818 0.0 2.68694   Low
cufflinks 1.35756 0.0 4.64862   High
cufflinks 0.695194 0.0 2.81652    
cufflinks 0.839721 0.0 3.26627    
cufflinks 0.226        
cufflinks 0.087       Low
cufflinks 0.541        
cufflinks 0.542        
cufflinks 0.428        
cufflinks 0.076       Low
cufflinks 0.514        
cufflinks 0.095       Low
cufflinks 0.653        
cufflinks 0.981       High
cufflinks 0.396        
cufflinks 0.094       Low
cufflinks 0.514        
cufflinks 0.618        
cufflinks 0.196        
cufflinks 0.451        
cufflinks 0.108       Low

0 Strain