Gene : Glyma.18G046700 G. max Wm82.a2.v1
Defline:  (1 of 8) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  467
Name:  ? Glyma.18G046700 Secondary Identifier:  ? PAC:30557407
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G046700 0.5kb upstream 0.5kb upstream 2473 true Chr18: 4080571-4083043 Glycine max
Glyma.18G046700 0.5kb upstream 0.5kb upstream 500 false Chr18: 4082544-4083043 Glycine max
Glyma.18G046700 0.5kb downstream 0.5kb downstream 2473 true Chr18: 4080071-4082543 Glycine max
Glyma.18G046700 0.5kb downstream 0.5kb downstream 500 false Chr18: 4080071-4080570 Glycine max
Glyma.18G046700 1.0kb upstream 1.0kb upstream 2973 true Chr18: 4080571-4083543 Glycine max
Glyma.18G046700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4082544-4083543 Glycine max
Glyma.18G046700 1.0kb downstream 1.0kb downstream 2973 true Chr18: 4079571-4082543 Glycine max
Glyma.18G046700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4079571-4080570 Glycine max
Glyma.18G046700 2.0kb upstream 2.0kb upstream 3973 true Chr18: 4080571-4084543 Glycine max
Glyma.18G046700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4082544-4084543 Glycine max
Glyma.18G046700 2.0kb downstream 2.0kb downstream 3973 true Chr18: 4078571-4082543 Glycine max
Glyma.18G046700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4078571-4080570 Glycine max
Glyma.18G046700 5.0kb upstream 5.0kb upstream 6973 true Chr18: 4080571-4087543 Glycine max
Glyma.18G046700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4082544-4087543 Glycine max
Glyma.18G046700 5.0kb downstream 5.0kb downstream 6973 true Chr18: 4075571-4082543 Glycine max
Glyma.18G046700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4075571-4080570 Glycine max
Glyma.18G046700 10.0kb upstream 10.0kb upstream 11973 true Chr18: 4080571-4092543 Glycine max
Glyma.18G046700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4082544-4092543 Glycine max
Glyma.18G046700 10.0kb downstream 10.0kb downstream 11973 true Chr18: 4070571-4082543 Glycine max
Glyma.18G046700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4070571-4080570 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312972 5265 Fabidae View MSA
124068012 5270 Rosid View MSA
123738573 5271 Pentapetalae View MSA
122791762 5272 Eudicot View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.52967 0.0 23.0744   High
cufflinks 3.89666 0.0 17.8128   High
cufflinks 1.2645 0.0 7.53599    
cufflinks 0.555577 0.0 2.78045    
cufflinks 0.160357 0.0 1.29996 Low  
cufflinks 0.389431 0.0 1.86231    
cufflinks 2.00838 0.0 10.9338    
cufflinks 0.277778 0.0 2.12675    
cufflinks 0.0226361 0.0 0.114631 Low Low
cufflinks 0.315        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.1        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.349        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.149        
cufflinks 1.075        
cufflinks 5.936        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.449        
cufflinks 4.388        
cufflinks 0.01     Low Low
cufflinks 5.679        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain