Gene : Glyma.18G046800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31384:SF2 - AUXIN RESPONSE FACTOR 8 Genomic Order:  468
Name:  ? Glyma.18G046800 Secondary Identifier:  ? PAC:30558444
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G046800 0.5kb upstream 0.5kb upstream 8035 true Chr18: 4088851-4096885 Glycine max
Glyma.18G046800 0.5kb upstream 0.5kb upstream 500 false Chr18: 4088851-4089350 Glycine max
Glyma.18G046800 0.5kb downstream 0.5kb downstream 8035 true Chr18: 4089351-4097385 Glycine max
Glyma.18G046800 0.5kb downstream 0.5kb downstream 500 false Chr18: 4096886-4097385 Glycine max
Glyma.18G046800 1.0kb upstream 1.0kb upstream 8535 true Chr18: 4088351-4096885 Glycine max
Glyma.18G046800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4088351-4089350 Glycine max
Glyma.18G046800 1.0kb downstream 1.0kb downstream 8535 true Chr18: 4089351-4097885 Glycine max
Glyma.18G046800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4096886-4097885 Glycine max
Glyma.18G046800 2.0kb upstream 2.0kb upstream 9535 true Chr18: 4087351-4096885 Glycine max
Glyma.18G046800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4087351-4089350 Glycine max
Glyma.18G046800 2.0kb downstream 2.0kb downstream 9535 true Chr18: 4089351-4098885 Glycine max
Glyma.18G046800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4096886-4098885 Glycine max
Glyma.18G046800 5.0kb upstream 5.0kb upstream 12535 true Chr18: 4084351-4096885 Glycine max
Glyma.18G046800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4084351-4089350 Glycine max
Glyma.18G046800 5.0kb downstream 5.0kb downstream 12535 true Chr18: 4089351-4101885 Glycine max
Glyma.18G046800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4096886-4101885 Glycine max
Glyma.18G046800 10.0kb upstream 10.0kb upstream 17535 true Chr18: 4079351-4096885 Glycine max
Glyma.18G046800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4079351-4089350 Glycine max
Glyma.18G046800 10.0kb downstream 10.0kb downstream 17535 true Chr18: 4089351-4106885 Glycine max
Glyma.18G046800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4096886-4106885 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297104 5265 Fabidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.51568 0.0 4.66533   Low
cufflinks 15.3611 0.0 41.7115   High
cufflinks 4.70483 0.0 12.7666    
cufflinks 6.52776 0.0 17.4779    
cufflinks 8.54959 0.0 22.8092    
cufflinks 3.32565 0.0 9.27075    
cufflinks 3.72291 0.0 10.2796    
cufflinks 7.46285 0.0 19.9266    
cufflinks 3.096 0.0 8.69795    
cufflinks 8.783     High High
cufflinks 0.741       Low
cufflinks 5.606        
cufflinks 3.736        
cufflinks 4.778        
cufflinks 0.318       Low
cufflinks 2.185        
cufflinks 1.864        
cufflinks 8.534     High High
cufflinks 10.429     High High
cufflinks 1.682        
cufflinks 0.959        
cufflinks 2.147        
cufflinks 2.052        
cufflinks 0.781       Low
cufflinks 1.633        
cufflinks 1.803        

0 Strain