Gene : Glyma.18G047900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22911 - ACYL-MALONYL CONDENSING ENZYME-RELATED Genomic Order:  479
Name:  ? Glyma.18G047900 Secondary Identifier:  ? PAC:30555137
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G047900 0.5kb upstream 0.5kb upstream 3981 true Chr18: 4157528-4161508 Glycine max
Glyma.18G047900 0.5kb upstream 0.5kb upstream 500 false Chr18: 4157528-4158027 Glycine max
Glyma.18G047900 0.5kb downstream 0.5kb downstream 3981 true Chr18: 4158028-4162008 Glycine max
Glyma.18G047900 0.5kb downstream 0.5kb downstream 500 false Chr18: 4161509-4162008 Glycine max
Glyma.18G047900 1.0kb upstream 1.0kb upstream 4481 true Chr18: 4157028-4161508 Glycine max
Glyma.18G047900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4157028-4158027 Glycine max
Glyma.18G047900 1.0kb downstream 1.0kb downstream 4481 true Chr18: 4158028-4162508 Glycine max
Glyma.18G047900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4161509-4162508 Glycine max
Glyma.18G047900 2.0kb upstream 2.0kb upstream 5481 true Chr18: 4156028-4161508 Glycine max
Glyma.18G047900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4156028-4158027 Glycine max
Glyma.18G047900 2.0kb downstream 2.0kb downstream 5481 true Chr18: 4158028-4163508 Glycine max
Glyma.18G047900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4161509-4163508 Glycine max
Glyma.18G047900 5.0kb upstream 5.0kb upstream 8481 true Chr18: 4153028-4161508 Glycine max
Glyma.18G047900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4153028-4158027 Glycine max
Glyma.18G047900 5.0kb downstream 5.0kb downstream 8481 true Chr18: 4158028-4166508 Glycine max
Glyma.18G047900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4161509-4166508 Glycine max
Glyma.18G047900 10.0kb upstream 10.0kb upstream 13481 true Chr18: 4148028-4161508 Glycine max
Glyma.18G047900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4148028-4158027 Glycine max
Glyma.18G047900 10.0kb downstream 10.0kb downstream 13481 true Chr18: 4158028-4171508 Glycine max
Glyma.18G047900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4161509-4171508 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040883 5273 Angiosperm View MSA
122308531 5265 Fabidae View MSA
124066497 5270 Rosid View MSA
123739525 5271 Pentapetalae View MSA
122790442 5272 Eudicot View MSA
121351564 5274 Embryophyte View MSA
123424417 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.87634 0.0 27.0308    
cufflinks 7.29952 0.0 20.5181    
cufflinks 4.39076 0.0 13.1722    
cufflinks 14.2022 0.0 38.1339   High
cufflinks 4.60372 0.0 13.6393    
cufflinks 2.15593 0.0 7.10943   Low
cufflinks 7.21787 0.0 20.2746    
cufflinks 8.96542 0.0 24.7004    
cufflinks 3.06657 0.0 9.62559   Low
cufflinks 1.9        
cufflinks 0.131       Low
cufflinks 2.419        
cufflinks 0.866        
cufflinks 0.939        
cufflinks 0.748        
cufflinks 2.608        
cufflinks 0.157       Low
cufflinks 2.837        
cufflinks 3.291        
cufflinks 3.152        
cufflinks 0.274       Low
cufflinks 3.152        
cufflinks 2.482        
cufflinks 0.28       Low
cufflinks 2.965        
cufflinks 0.312       Low

0 Strain