Gene : Glyma.18G048700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13439//PTHR13439:SF13 - CT120 PROTEIN Genomic Order:  487
Name:  ? Glyma.18G048700 Secondary Identifier:  ? PAC:30555069
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G048700 0.5kb upstream 0.5kb upstream 5910 true Chr18: 4190724-4196633 Glycine max
Glyma.18G048700 0.5kb upstream 0.5kb upstream 500 false Chr18: 4190724-4191223 Glycine max
Glyma.18G048700 0.5kb downstream 0.5kb downstream 5910 true Chr18: 4191224-4197133 Glycine max
Glyma.18G048700 0.5kb downstream 0.5kb downstream 500 false Chr18: 4196634-4197133 Glycine max
Glyma.18G048700 1.0kb upstream 1.0kb upstream 6410 true Chr18: 4190224-4196633 Glycine max
Glyma.18G048700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4190224-4191223 Glycine max
Glyma.18G048700 1.0kb downstream 1.0kb downstream 6410 true Chr18: 4191224-4197633 Glycine max
Glyma.18G048700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4196634-4197633 Glycine max
Glyma.18G048700 2.0kb upstream 2.0kb upstream 7410 true Chr18: 4189224-4196633 Glycine max
Glyma.18G048700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4189224-4191223 Glycine max
Glyma.18G048700 2.0kb downstream 2.0kb downstream 7410 true Chr18: 4191224-4198633 Glycine max
Glyma.18G048700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4196634-4198633 Glycine max
Glyma.18G048700 5.0kb upstream 5.0kb upstream 10410 true Chr18: 4186224-4196633 Glycine max
Glyma.18G048700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4186224-4191223 Glycine max
Glyma.18G048700 5.0kb downstream 5.0kb downstream 10410 true Chr18: 4191224-4201633 Glycine max
Glyma.18G048700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4196634-4201633 Glycine max
Glyma.18G048700 10.0kb upstream 10.0kb upstream 15410 true Chr18: 4181224-4196633 Glycine max
Glyma.18G048700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4181224-4191223 Glycine max
Glyma.18G048700 10.0kb downstream 10.0kb downstream 15410 true Chr18: 4191224-4206633 Glycine max
Glyma.18G048700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4196634-4206633 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302925 5265 Fabidae View MSA
124066544 5270 Rosid View MSA
123743860 5271 Pentapetalae View MSA
122791949 5272 Eudicot View MSA
122042295 5273 Angiosperm View MSA
121347899 5274 Embryophyte View MSA
123428797 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.7116 0.0 88.5375    
cufflinks 16.2407 0.0 70.5487    
cufflinks 32.7143 0.0 155.096 High High
cufflinks 18.981 0.0 89.2685    
cufflinks 13.0665 0.0 61.0138    
cufflinks 30.6305 0.0 123.228 High High
cufflinks 10.4123 0.0 46.3624   Low
cufflinks 20.2029 0.0 95.8884    
cufflinks 16.3468 0.0 76.9214    
cufflinks 0.598        
cufflinks 0.22       Low
cufflinks 0.825       High
cufflinks 0.575        
cufflinks 0.402        
cufflinks 0.162       Low
cufflinks 0.496        
cufflinks 0.447        
cufflinks 0.767       High
cufflinks 0.551        
cufflinks 0.6        
cufflinks 0.203       Low
cufflinks 0.624        
cufflinks 0.51        
cufflinks 0.312        
cufflinks 0.542        
cufflinks 0.251       Low

0 Strain