Gene : Glyma.18G037700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11937:SF16 - ACTIN-RELATED PROTEIN 5 Genomic Order:  377
Name:  ? Glyma.18G037700 Secondary Identifier:  ? PAC:30556000
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G037700 0.5kb upstream 0.5kb upstream 6275 true Chr18: 3007103-3013377 Glycine max
Glyma.18G037700 0.5kb upstream 0.5kb upstream 500 false Chr18: 3007103-3007602 Glycine max
Glyma.18G037700 0.5kb downstream 0.5kb downstream 6275 true Chr18: 3007603-3013877 Glycine max
Glyma.18G037700 0.5kb downstream 0.5kb downstream 500 false Chr18: 3013378-3013877 Glycine max
Glyma.18G037700 1.0kb upstream 1.0kb upstream 6775 true Chr18: 3006603-3013377 Glycine max
Glyma.18G037700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3006603-3007602 Glycine max
Glyma.18G037700 1.0kb downstream 1.0kb downstream 6775 true Chr18: 3007603-3014377 Glycine max
Glyma.18G037700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3013378-3014377 Glycine max
Glyma.18G037700 2.0kb upstream 2.0kb upstream 7775 true Chr18: 3005603-3013377 Glycine max
Glyma.18G037700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3005603-3007602 Glycine max
Glyma.18G037700 2.0kb downstream 2.0kb downstream 7775 true Chr18: 3007603-3015377 Glycine max
Glyma.18G037700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3013378-3015377 Glycine max
Glyma.18G037700 5.0kb upstream 5.0kb upstream 10775 true Chr18: 3002603-3013377 Glycine max
Glyma.18G037700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3002603-3007602 Glycine max
Glyma.18G037700 5.0kb downstream 5.0kb downstream 10775 true Chr18: 3007603-3018377 Glycine max
Glyma.18G037700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3013378-3018377 Glycine max
Glyma.18G037700 10.0kb upstream 10.0kb upstream 15775 true Chr18: 2997603-3013377 Glycine max
Glyma.18G037700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2997603-3007602 Glycine max
Glyma.18G037700 10.0kb downstream 10.0kb downstream 15775 true Chr18: 3007603-3023377 Glycine max
Glyma.18G037700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3013378-3023377 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026482 5273 Angiosperm View MSA
122302593 5265 Fabidae View MSA
124068123 5270 Rosid View MSA
123742695 5271 Pentapetalae View MSA
122791684 5272 Eudicot View MSA
121345083 5274 Embryophyte View MSA
123380152 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.557882 0.0 1.98314   Low
cufflinks 3.2705 0.0 9.38303   High
cufflinks 0.548233 0.0 1.95127   Low
cufflinks 1.58387 0.0 5.00401    
cufflinks 2.1275 0.0 6.44755    
cufflinks 1.40119 0.0 4.50729    
cufflinks 2.46686 0.0 7.33429    
cufflinks 1.18316 0.0 3.892    
cufflinks 1.82784 0.0 5.66072    
cufflinks 0.813        
cufflinks 0.372       Low
cufflinks 0.691        
cufflinks 1.137        
cufflinks 1.354        
cufflinks 0.226       Low
cufflinks 1.397        
cufflinks 0.285       Low
cufflinks 0.968        
cufflinks 2.118       High
cufflinks 1.266        
cufflinks 0.43        
cufflinks 1.377        
cufflinks 1.563        
cufflinks 0.376       Low
cufflinks 1.378        
cufflinks 0.683        

0 Strain