Gene : Glyma.18G037900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  379
Name:  ? Glyma.18G037900 Secondary Identifier:  ? PAC:30555037
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G037900 0.5kb upstream 0.5kb upstream 6145 true Chr18: 3021786-3027930 Glycine max
Glyma.18G037900 0.5kb upstream 0.5kb upstream 500 false Chr18: 3027431-3027930 Glycine max
Glyma.18G037900 0.5kb downstream 0.5kb downstream 6145 true Chr18: 3021286-3027430 Glycine max
Glyma.18G037900 0.5kb downstream 0.5kb downstream 500 false Chr18: 3021286-3021785 Glycine max
Glyma.18G037900 1.0kb upstream 1.0kb upstream 6645 true Chr18: 3021786-3028430 Glycine max
Glyma.18G037900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3027431-3028430 Glycine max
Glyma.18G037900 1.0kb downstream 1.0kb downstream 6645 true Chr18: 3020786-3027430 Glycine max
Glyma.18G037900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3020786-3021785 Glycine max
Glyma.18G037900 2.0kb upstream 2.0kb upstream 7645 true Chr18: 3021786-3029430 Glycine max
Glyma.18G037900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3027431-3029430 Glycine max
Glyma.18G037900 2.0kb downstream 2.0kb downstream 7645 true Chr18: 3019786-3027430 Glycine max
Glyma.18G037900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3019786-3021785 Glycine max
Glyma.18G037900 5.0kb upstream 5.0kb upstream 10645 true Chr18: 3021786-3032430 Glycine max
Glyma.18G037900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3027431-3032430 Glycine max
Glyma.18G037900 5.0kb downstream 5.0kb downstream 10645 true Chr18: 3016786-3027430 Glycine max
Glyma.18G037900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3016786-3021785 Glycine max
Glyma.18G037900 10.0kb upstream 10.0kb upstream 15645 true Chr18: 3021786-3037430 Glycine max
Glyma.18G037900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3027431-3037430 Glycine max
Glyma.18G037900 10.0kb downstream 10.0kb downstream 15645 true Chr18: 3011786-3027430 Glycine max
Glyma.18G037900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3011786-3021785 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302089 5265 Fabidae View MSA
124064371 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.225 0.0 94.8273    
cufflinks 4.35974 0.0 18.2315    
cufflinks 52.5415 0.0 336.603 High High
cufflinks 3.48259 0.0 15.2919   Low
cufflinks 7.59168 0.0 29.3664    
cufflinks 16.1697 0.0 73.5798    
cufflinks 7.24473 0.0 35.1061    
cufflinks 6.15423 0.0 31.7612    
cufflinks 6.57552 0.0 25.832    
cufflinks 0.786       Low
cufflinks 4.833       High
cufflinks 2.599        
cufflinks 1.254        
cufflinks 0.972       Low
cufflinks 2.598        
cufflinks 2.62        
cufflinks 1.349        
cufflinks 0.765       Low
cufflinks 0.842       Low
cufflinks 1.758        
cufflinks 3.398        
cufflinks 2.356        
cufflinks 1.589        
cufflinks 4.579       High
cufflinks 3.019        
cufflinks 8.733     High High

0 Strain