Gene : Glyma.18G038200 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR21596:SF3 - F16A14.2-RELATED Genomic Order:  382
Name:  ? Glyma.18G038200 Secondary Identifier:  ? PAC:30558585
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G038200 0.5kb upstream 0.5kb upstream 3459 true Chr18: 3075229-3078687 Glycine max
Glyma.18G038200 0.5kb upstream 0.5kb upstream 500 false Chr18: 3078188-3078687 Glycine max
Glyma.18G038200 0.5kb downstream 0.5kb downstream 3459 true Chr18: 3074729-3078187 Glycine max
Glyma.18G038200 0.5kb downstream 0.5kb downstream 500 false Chr18: 3074729-3075228 Glycine max
Glyma.18G038200 1.0kb upstream 1.0kb upstream 3959 true Chr18: 3075229-3079187 Glycine max
Glyma.18G038200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3078188-3079187 Glycine max
Glyma.18G038200 1.0kb downstream 1.0kb downstream 3959 true Chr18: 3074229-3078187 Glycine max
Glyma.18G038200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3074229-3075228 Glycine max
Glyma.18G038200 2.0kb upstream 2.0kb upstream 4959 true Chr18: 3075229-3080187 Glycine max
Glyma.18G038200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3078188-3080187 Glycine max
Glyma.18G038200 2.0kb downstream 2.0kb downstream 4959 true Chr18: 3073229-3078187 Glycine max
Glyma.18G038200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3073229-3075228 Glycine max
Glyma.18G038200 5.0kb upstream 5.0kb upstream 7959 true Chr18: 3075229-3083187 Glycine max
Glyma.18G038200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3078188-3083187 Glycine max
Glyma.18G038200 5.0kb downstream 5.0kb downstream 7959 true Chr18: 3070229-3078187 Glycine max
Glyma.18G038200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3070229-3075228 Glycine max
Glyma.18G038200 10.0kb upstream 10.0kb upstream 12959 true Chr18: 3075229-3088187 Glycine max
Glyma.18G038200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3078188-3088187 Glycine max
Glyma.18G038200 10.0kb downstream 10.0kb downstream 12959 true Chr18: 3065229-3078187 Glycine max
Glyma.18G038200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3065229-3075228 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298797 5265 Fabidae View MSA
124072239 5270 Rosid View MSA
123753047 5271 Pentapetalae View MSA
122797032 5272 Eudicot View MSA
122049313 5273 Angiosperm View MSA
121351594 5274 Embryophyte View MSA
123382240 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.420082 0.0 1.58324   High
cufflinks 0.0149917 0.0 0.0679878 Low  
cufflinks 0.0184499 0.0 0.0816649 Low  
cufflinks 0.0246443 0.0 0.106748 Low  
cufflinks 0.0269324 0.0 0.116292 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0280772 0.0 0.120926 Low  
cufflinks 0.0304813 0.0 0.129978 Low  
cufflinks 0.0939912 0.0 0.376293 Low  
cufflinks 1.025       High
cufflinks 0.487        
cufflinks 0.206        
cufflinks 0.128        
cufflinks 0.066     Low  
cufflinks 0.084        
cufflinks 0.13        
cufflinks 5.638       High
cufflinks 0.106     Low  
cufflinks 0.043     Low Low
cufflinks 0.073     Low  
cufflinks 0.429        
cufflinks 0.101        
cufflinks 0.057     Low  
cufflinks 0.189        
cufflinks 0.04     Low Low
cufflinks 1.429       High

0 Strain