Gene : Glyma.18G038300 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG3894 - SNARE protein Syntaxin 18/UFE1 Genomic Order:  383
Name:  ? Glyma.18G038300 Secondary Identifier:  ? PAC:30554734
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G038300 0.5kb upstream 0.5kb upstream 5414 true Chr18: 3085275-3090688 Glycine max
Glyma.18G038300 0.5kb upstream 0.5kb upstream 500 false Chr18: 3090189-3090688 Glycine max
Glyma.18G038300 0.5kb downstream 0.5kb downstream 5414 true Chr18: 3084775-3090188 Glycine max
Glyma.18G038300 0.5kb downstream 0.5kb downstream 500 false Chr18: 3084775-3085274 Glycine max
Glyma.18G038300 1.0kb upstream 1.0kb upstream 5914 true Chr18: 3085275-3091188 Glycine max
Glyma.18G038300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3090189-3091188 Glycine max
Glyma.18G038300 1.0kb downstream 1.0kb downstream 5914 true Chr18: 3084275-3090188 Glycine max
Glyma.18G038300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3084275-3085274 Glycine max
Glyma.18G038300 2.0kb upstream 2.0kb upstream 6914 true Chr18: 3085275-3092188 Glycine max
Glyma.18G038300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3090189-3092188 Glycine max
Glyma.18G038300 2.0kb downstream 2.0kb downstream 6914 true Chr18: 3083275-3090188 Glycine max
Glyma.18G038300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3083275-3085274 Glycine max
Glyma.18G038300 5.0kb upstream 5.0kb upstream 9914 true Chr18: 3085275-3095188 Glycine max
Glyma.18G038300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3090189-3095188 Glycine max
Glyma.18G038300 5.0kb downstream 5.0kb downstream 9914 true Chr18: 3080275-3090188 Glycine max
Glyma.18G038300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3080275-3085274 Glycine max
Glyma.18G038300 10.0kb upstream 10.0kb upstream 14914 true Chr18: 3085275-3100188 Glycine max
Glyma.18G038300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3090189-3100188 Glycine max
Glyma.18G038300 10.0kb downstream 10.0kb downstream 14914 true Chr18: 3075275-3090188 Glycine max
Glyma.18G038300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3075275-3085274 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304424 5265 Fabidae View MSA
124067281 5270 Rosid View MSA
123745159 5271 Pentapetalae View MSA
122793118 5272 Eudicot View MSA
122047890 5273 Angiosperm View MSA
121350157 5274 Embryophyte View MSA
123381596 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.01838 0.0 11.5847   Low
cufflinks 16.8245 0.0 44.9776   High
cufflinks 4.28398 0.0 12.1611   Low
cufflinks 8.42973 0.0 22.743    
cufflinks 6.7455 0.0 18.4938    
cufflinks 4.95482 0.0 13.9578    
cufflinks 14.8359 0.0 39.5842   High
cufflinks 8.94166 0.0 24.068    
cufflinks 11.241 0.0 30.0563    
cufflinks 4.774        
cufflinks 0.478       Low
cufflinks 4.736        
cufflinks 4.569        
cufflinks 4.793        
cufflinks 2.429        
cufflinks 3.74        
cufflinks 1.985        
cufflinks 6.526       High
cufflinks 9.766     High High
cufflinks 3.287        
cufflinks 0.773       Low
cufflinks 3.917        
cufflinks 4.583        
cufflinks 0.611       Low
cufflinks 3.241        
cufflinks 1.76        

0 Strain