Gene : Glyma.18G039000 G. max Wm82.a2.v1
Defline:  (1 of 4) 3.4.21.108 - HtrA2 peptidase / Serine proteinase OMI Genomic Order:  390
Name:  ? Glyma.18G039000 Secondary Identifier:  ? PAC:30556982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G039000 0.5kb upstream 0.5kb upstream 18298 true Chr18: 3140338-3158635 Glycine max
Glyma.18G039000 0.5kb upstream 0.5kb upstream 500 false Chr18: 3158136-3158635 Glycine max
Glyma.18G039000 0.5kb downstream 0.5kb downstream 18298 true Chr18: 3139838-3158135 Glycine max
Glyma.18G039000 0.5kb downstream 0.5kb downstream 500 false Chr18: 3139838-3140337 Glycine max
Glyma.18G039000 1.0kb upstream 1.0kb upstream 18798 true Chr18: 3140338-3159135 Glycine max
Glyma.18G039000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3158136-3159135 Glycine max
Glyma.18G039000 1.0kb downstream 1.0kb downstream 18798 true Chr18: 3139338-3158135 Glycine max
Glyma.18G039000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3139338-3140337 Glycine max
Glyma.18G039000 2.0kb upstream 2.0kb upstream 19798 true Chr18: 3140338-3160135 Glycine max
Glyma.18G039000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3158136-3160135 Glycine max
Glyma.18G039000 2.0kb downstream 2.0kb downstream 19798 true Chr18: 3138338-3158135 Glycine max
Glyma.18G039000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3138338-3140337 Glycine max
Glyma.18G039000 5.0kb upstream 5.0kb upstream 22798 true Chr18: 3140338-3163135 Glycine max
Glyma.18G039000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3158136-3163135 Glycine max
Glyma.18G039000 5.0kb downstream 5.0kb downstream 22798 true Chr18: 3135338-3158135 Glycine max
Glyma.18G039000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3135338-3140337 Glycine max
Glyma.18G039000 10.0kb upstream 10.0kb upstream 27798 true Chr18: 3140338-3168135 Glycine max
Glyma.18G039000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3158136-3168135 Glycine max
Glyma.18G039000 10.0kb downstream 10.0kb downstream 27798 true Chr18: 3130338-3158135 Glycine max
Glyma.18G039000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3130338-3140337 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304692 5265 Fabidae View MSA
124066487 5270 Rosid View MSA
123749112 5271 Pentapetalae View MSA
122789271 5272 Eudicot View MSA
122042652 5273 Angiosperm View MSA
121347619 5274 Embryophyte View MSA
123428262 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2779 0.0 38.8933    
cufflinks 8.02659 0.0 21.4161    
cufflinks 9.21427 0.0 24.6393    
cufflinks 20.1802 0.0 56.6776 High High
cufflinks 14.3205 0.0 39.0202    
cufflinks 5.69575 0.0 15.2582   Low
cufflinks 9.08205 0.0 24.2638    
cufflinks 9.0901 0.0 24.2871    
cufflinks 10.2777 0.0 27.5485    
cufflinks 2.102        
cufflinks 0.803       Low
cufflinks 3.172        
cufflinks 3.678       High
cufflinks 3.651       High
cufflinks 1.862        
cufflinks 3.065        
cufflinks 3.406        
cufflinks 3.187        
cufflinks 3.033        
cufflinks 2.348        
cufflinks 1.383       Low
cufflinks 2.782        
cufflinks 2.321        
cufflinks 1.219       Low
cufflinks 2.67        
cufflinks 2.102        

0 Strain