Gene : Glyma.18G039100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF65 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  391
Name:  ? Glyma.18G039100 Secondary Identifier:  ? PAC:30554574
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G039100 0.5kb upstream 0.5kb upstream 4685 true Chr18: 3159282-3163966 Glycine max
Glyma.18G039100 0.5kb upstream 0.5kb upstream 500 false Chr18: 3163467-3163966 Glycine max
Glyma.18G039100 0.5kb downstream 0.5kb downstream 4685 true Chr18: 3158782-3163466 Glycine max
Glyma.18G039100 0.5kb downstream 0.5kb downstream 500 false Chr18: 3158782-3159281 Glycine max
Glyma.18G039100 1.0kb upstream 1.0kb upstream 5185 true Chr18: 3159282-3164466 Glycine max
Glyma.18G039100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3163467-3164466 Glycine max
Glyma.18G039100 1.0kb downstream 1.0kb downstream 5185 true Chr18: 3158282-3163466 Glycine max
Glyma.18G039100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3158282-3159281 Glycine max
Glyma.18G039100 2.0kb upstream 2.0kb upstream 6185 true Chr18: 3159282-3165466 Glycine max
Glyma.18G039100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3163467-3165466 Glycine max
Glyma.18G039100 2.0kb downstream 2.0kb downstream 6185 true Chr18: 3157282-3163466 Glycine max
Glyma.18G039100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3157282-3159281 Glycine max
Glyma.18G039100 5.0kb upstream 5.0kb upstream 9185 true Chr18: 3159282-3168466 Glycine max
Glyma.18G039100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3163467-3168466 Glycine max
Glyma.18G039100 5.0kb downstream 5.0kb downstream 9185 true Chr18: 3154282-3163466 Glycine max
Glyma.18G039100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3154282-3159281 Glycine max
Glyma.18G039100 10.0kb upstream 10.0kb upstream 14185 true Chr18: 3159282-3173466 Glycine max
Glyma.18G039100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3163467-3173466 Glycine max
Glyma.18G039100 10.0kb downstream 10.0kb downstream 14185 true Chr18: 3149282-3163466 Glycine max
Glyma.18G039100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3149282-3159281 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306926 5265 Fabidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7938 0.0 29.3159    
cufflinks 3.16795 0.0 9.89331   Low
cufflinks 14.8762 0.0 39.87   High
cufflinks 12.5042 0.0 33.6992   High
cufflinks 3.44361 0.0 10.5578   Low
cufflinks 5.51432 0.0 15.9247    
cufflinks 5.68676 0.0 16.3965    
cufflinks 7.73771 0.0 21.5315    
cufflinks 3.36059 0.0 10.3607   Low
cufflinks 1.234        
cufflinks 0.687       Low
cufflinks 3.762       High
cufflinks 1.524        
cufflinks 0.925        
cufflinks 0.526       Low
cufflinks 1.817        
cufflinks 1.16        
cufflinks 3.107       High
cufflinks 1.279        
cufflinks 1.94        
cufflinks 0.912        
cufflinks 1.816        
cufflinks 1.92        
cufflinks 1.458        
cufflinks 2.125        
cufflinks 1.585        

0 Strain