Gene : Glyma.18G039500 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Genomic Order:  395
Name:  ? Glyma.18G039500 Secondary Identifier:  ? PAC:30557300
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G039500 0.5kb upstream 0.5kb upstream 1591 true Chr18: 3217763-3219353 Glycine max
Glyma.18G039500 0.5kb upstream 0.5kb upstream 500 false Chr18: 3217763-3218262 Glycine max
Glyma.18G039500 0.5kb downstream 0.5kb downstream 1591 true Chr18: 3218263-3219853 Glycine max
Glyma.18G039500 0.5kb downstream 0.5kb downstream 500 false Chr18: 3219354-3219853 Glycine max
Glyma.18G039500 1.0kb upstream 1.0kb upstream 2091 true Chr18: 3217263-3219353 Glycine max
Glyma.18G039500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3217263-3218262 Glycine max
Glyma.18G039500 1.0kb downstream 1.0kb downstream 2091 true Chr18: 3218263-3220353 Glycine max
Glyma.18G039500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3219354-3220353 Glycine max
Glyma.18G039500 2.0kb upstream 2.0kb upstream 3091 true Chr18: 3216263-3219353 Glycine max
Glyma.18G039500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3216263-3218262 Glycine max
Glyma.18G039500 2.0kb downstream 2.0kb downstream 3091 true Chr18: 3218263-3221353 Glycine max
Glyma.18G039500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3219354-3221353 Glycine max
Glyma.18G039500 5.0kb upstream 5.0kb upstream 6091 true Chr18: 3213263-3219353 Glycine max
Glyma.18G039500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3213263-3218262 Glycine max
Glyma.18G039500 5.0kb downstream 5.0kb downstream 6091 true Chr18: 3218263-3224353 Glycine max
Glyma.18G039500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3219354-3224353 Glycine max
Glyma.18G039500 10.0kb upstream 10.0kb upstream 11091 true Chr18: 3208263-3219353 Glycine max
Glyma.18G039500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3208263-3218262 Glycine max
Glyma.18G039500 10.0kb downstream 10.0kb downstream 11091 true Chr18: 3218263-3229353 Glycine max
Glyma.18G039500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3219354-3229353 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306413 5265 Fabidae View MSA
124061812 5270 Rosid View MSA
123752217 5271 Pentapetalae View MSA
122794850 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.00091 0.0 23.218    
cufflinks 19.0414 0.0 51.3344    
cufflinks 34.5919 0.0 92.3267 High High
cufflinks 4.17682 0.0 13.301   Low
cufflinks 19.0963 0.0 51.2974    
cufflinks 33.482 0.0 89.4016 High High
cufflinks 5.29027 0.0 16.2032   Low
cufflinks 12.0781 0.0 33.5925    
cufflinks 8.34824 0.0 24.0924    
cufflinks 40.332     High High
cufflinks 16.001     High  
cufflinks 36.721     High  
cufflinks 37.483     High  
cufflinks 19.233     High  
cufflinks 4.389       Low
cufflinks 29.969     High  
cufflinks 81.196     High High
cufflinks 22.323     High  
cufflinks 12.162     High  
cufflinks 12.687     High  
cufflinks 16.033     High  
cufflinks 18.199     High  
cufflinks 13.302     High  
cufflinks 7.745     High Low
cufflinks 15.24     High  
cufflinks 39.844     High  

0 Strain