Gene : Glyma.18G039700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23180//PTHR23180:SF285 - CENTAURIN/ARF Genomic Order:  397
Name:  ? Glyma.18G039700 Secondary Identifier:  ? PAC:30554520
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G039700 0.5kb upstream 0.5kb upstream 3093 true Chr18: 3231910-3235002 Glycine max
Glyma.18G039700 0.5kb upstream 0.5kb upstream 500 false Chr18: 3231910-3232409 Glycine max
Glyma.18G039700 0.5kb downstream 0.5kb downstream 3093 true Chr18: 3232410-3235502 Glycine max
Glyma.18G039700 0.5kb downstream 0.5kb downstream 500 false Chr18: 3235003-3235502 Glycine max
Glyma.18G039700 1.0kb upstream 1.0kb upstream 3593 true Chr18: 3231410-3235002 Glycine max
Glyma.18G039700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3231410-3232409 Glycine max
Glyma.18G039700 1.0kb downstream 1.0kb downstream 3593 true Chr18: 3232410-3236002 Glycine max
Glyma.18G039700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3235003-3236002 Glycine max
Glyma.18G039700 2.0kb upstream 2.0kb upstream 4593 true Chr18: 3230410-3235002 Glycine max
Glyma.18G039700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3230410-3232409 Glycine max
Glyma.18G039700 2.0kb downstream 2.0kb downstream 4593 true Chr18: 3232410-3237002 Glycine max
Glyma.18G039700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3235003-3237002 Glycine max
Glyma.18G039700 5.0kb upstream 5.0kb upstream 7593 true Chr18: 3227410-3235002 Glycine max
Glyma.18G039700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3227410-3232409 Glycine max
Glyma.18G039700 5.0kb downstream 5.0kb downstream 7593 true Chr18: 3232410-3240002 Glycine max
Glyma.18G039700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3235003-3240002 Glycine max
Glyma.18G039700 10.0kb upstream 10.0kb upstream 12593 true Chr18: 3222410-3235002 Glycine max
Glyma.18G039700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3222410-3232409 Glycine max
Glyma.18G039700 10.0kb downstream 10.0kb downstream 12593 true Chr18: 3232410-3245002 Glycine max
Glyma.18G039700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3235003-3245002 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302781 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.823 0.0 121.991 High High
cufflinks 10.5352 0.0 41.7444    
cufflinks 17.4227 0.0 60.9384    
cufflinks 4.71827 0.0 20.4617   Low
cufflinks 11.2833 0.0 44.3592    
cufflinks 34.1665 0.0 113.098 High High
cufflinks 7.58003 0.0 28.6346    
cufflinks 9.35624 0.0 38.7144    
cufflinks 18.626 0.0 64.9447    
cufflinks 0.988       Low
cufflinks 2.31        
cufflinks 2.579        
cufflinks 1.65        
cufflinks 0.606       Low
cufflinks 3.689        
cufflinks 4.37        
cufflinks 3.409        
cufflinks 2.255        
cufflinks 2.4        
cufflinks 4.136        
cufflinks 2.959        
cufflinks 5.544       High
cufflinks 3.815        
cufflinks 3.257        
cufflinks 4.193        
cufflinks 2.924        

0 Strain