Gene : Glyma.18G040000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31636:SF47 - DELLA PROTEIN RGL1-RELATED Genomic Order:  400
Name:  ? Glyma.18G040000 Secondary Identifier:  ? PAC:30558606
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G040000 0.5kb upstream 0.5kb upstream 3617 true Chr18: 3278869-3282485 Glycine max
Glyma.18G040000 0.5kb upstream 0.5kb upstream 500 false Chr18: 3281986-3282485 Glycine max
Glyma.18G040000 0.5kb downstream 0.5kb downstream 3617 true Chr18: 3278369-3281985 Glycine max
Glyma.18G040000 0.5kb downstream 0.5kb downstream 500 false Chr18: 3278369-3278868 Glycine max
Glyma.18G040000 1.0kb upstream 1.0kb upstream 4117 true Chr18: 3278869-3282985 Glycine max
Glyma.18G040000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3281986-3282985 Glycine max
Glyma.18G040000 1.0kb downstream 1.0kb downstream 4117 true Chr18: 3277869-3281985 Glycine max
Glyma.18G040000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3277869-3278868 Glycine max
Glyma.18G040000 2.0kb upstream 2.0kb upstream 5117 true Chr18: 3278869-3283985 Glycine max
Glyma.18G040000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3281986-3283985 Glycine max
Glyma.18G040000 2.0kb downstream 2.0kb downstream 5117 true Chr18: 3276869-3281985 Glycine max
Glyma.18G040000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3276869-3278868 Glycine max
Glyma.18G040000 5.0kb upstream 5.0kb upstream 8117 true Chr18: 3278869-3286985 Glycine max
Glyma.18G040000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3281986-3286985 Glycine max
Glyma.18G040000 5.0kb downstream 5.0kb downstream 8117 true Chr18: 3273869-3281985 Glycine max
Glyma.18G040000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3273869-3278868 Glycine max
Glyma.18G040000 10.0kb upstream 10.0kb upstream 13117 true Chr18: 3278869-3291985 Glycine max
Glyma.18G040000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3281986-3291985 Glycine max
Glyma.18G040000 10.0kb downstream 10.0kb downstream 13117 true Chr18: 3268869-3281985 Glycine max
Glyma.18G040000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3268869-3278868 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314578 5265 Fabidae View MSA
124070083 5270 Rosid View MSA
123746513 5271 Pentapetalae View MSA
122796681 5272 Eudicot View MSA
122044707 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1003 0.0 32.3246    
cufflinks 37.0363 0.0 107.551 High  
cufflinks 10.5253 0.0 28.0833   Low
cufflinks 8.58406 0.0 22.9508   Low
cufflinks 36.4978 0.0 106.904 High  
cufflinks 24.5687 0.0 68.3575 High  
cufflinks 70.8322 0.0 231.487 High High
cufflinks 32.2479 0.0 92.2157 High  
cufflinks 36.1807 0.0 105.255 High  
cufflinks 37.628     High  
cufflinks 2.152       Low
cufflinks 12.071     High  
cufflinks 26.255     High  
cufflinks 18.582     High  
cufflinks 5.225     High  
cufflinks 31.883     High  
cufflinks 4.59        
cufflinks 38.955     High High
cufflinks 21.19     High  
cufflinks 35.077     High  
cufflinks 2.199       Low
cufflinks 29.536     High  
cufflinks 25.368     High  
cufflinks 2.774       Low
cufflinks 32.551     High  
cufflinks 2.681       Low

0 Strain