Gene : Glyma.18G040200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 Genomic Order:  402
Name:  ? Glyma.18G040200 Secondary Identifier:  ? PAC:30555561
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G040200 0.5kb upstream 0.5kb upstream 1840 true Chr18: 3318219-3320058 Glycine max
Glyma.18G040200 0.5kb upstream 0.5kb upstream 500 false Chr18: 3318219-3318718 Glycine max
Glyma.18G040200 0.5kb downstream 0.5kb downstream 1840 true Chr18: 3318719-3320558 Glycine max
Glyma.18G040200 0.5kb downstream 0.5kb downstream 500 false Chr18: 3320059-3320558 Glycine max
Glyma.18G040200 1.0kb upstream 1.0kb upstream 2340 true Chr18: 3317719-3320058 Glycine max
Glyma.18G040200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3317719-3318718 Glycine max
Glyma.18G040200 1.0kb downstream 1.0kb downstream 2340 true Chr18: 3318719-3321058 Glycine max
Glyma.18G040200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3320059-3321058 Glycine max
Glyma.18G040200 2.0kb upstream 2.0kb upstream 3340 true Chr18: 3316719-3320058 Glycine max
Glyma.18G040200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3316719-3318718 Glycine max
Glyma.18G040200 2.0kb downstream 2.0kb downstream 3340 true Chr18: 3318719-3322058 Glycine max
Glyma.18G040200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3320059-3322058 Glycine max
Glyma.18G040200 5.0kb upstream 5.0kb upstream 6340 true Chr18: 3313719-3320058 Glycine max
Glyma.18G040200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3313719-3318718 Glycine max
Glyma.18G040200 5.0kb downstream 5.0kb downstream 6340 true Chr18: 3318719-3325058 Glycine max
Glyma.18G040200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3320059-3325058 Glycine max
Glyma.18G040200 10.0kb upstream 10.0kb upstream 11340 true Chr18: 3308719-3320058 Glycine max
Glyma.18G040200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3308719-3318718 Glycine max
Glyma.18G040200 10.0kb downstream 10.0kb downstream 11340 true Chr18: 3318719-3330058 Glycine max
Glyma.18G040200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3320059-3330058 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312653 5265 Fabidae View MSA
124070140 5270 Rosid View MSA
123738162 5271 Pentapetalae View MSA
122788684 5272 Eudicot View MSA
122049984 5273 Angiosperm View MSA
121311674 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.201921 0.0 0.796555 Low Low
cufflinks 12.2589 0.0 34.4406   High
cufflinks 1.30768 0.0 4.74407    
cufflinks 1.95616 0.0 6.88389    
cufflinks 4.69761 0.0 14.823    
cufflinks 4.35165 0.0 13.9155    
cufflinks 7.48881 0.0 22.1472    
cufflinks 0.953087 0.0 3.51351    
cufflinks 6.21747 0.0 18.9322    
cufflinks 1.265       Low
cufflinks 2.344        
cufflinks 2.015        
cufflinks 5.137        
cufflinks 3.88        
cufflinks 2.665        
cufflinks 7.799     High  
cufflinks 3.405        
cufflinks 2.449        
cufflinks 9.693     High High
cufflinks 4.446        
cufflinks 2.203        
cufflinks 6.618        
cufflinks 20.712     High High
cufflinks 0.907       Low
cufflinks 5.993        
cufflinks 2.791        

0 Strain