Gene : Glyma.18G041500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR28620:SF1 - PROTEIN F25B4.8, ISOFORM A Genomic Order:  415
Name:  ? Glyma.18G041500 Secondary Identifier:  ? PAC:30554858
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G041500 0.5kb upstream 0.5kb upstream 2034 true Chr18: 3525744-3527777 Glycine max
Glyma.18G041500 0.5kb upstream 0.5kb upstream 500 false Chr18: 3525744-3526243 Glycine max
Glyma.18G041500 0.5kb downstream 0.5kb downstream 2034 true Chr18: 3526244-3528277 Glycine max
Glyma.18G041500 0.5kb downstream 0.5kb downstream 500 false Chr18: 3527778-3528277 Glycine max
Glyma.18G041500 1.0kb upstream 1.0kb upstream 2534 true Chr18: 3525244-3527777 Glycine max
Glyma.18G041500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3525244-3526243 Glycine max
Glyma.18G041500 1.0kb downstream 1.0kb downstream 2534 true Chr18: 3526244-3528777 Glycine max
Glyma.18G041500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3527778-3528777 Glycine max
Glyma.18G041500 2.0kb upstream 2.0kb upstream 3534 true Chr18: 3524244-3527777 Glycine max
Glyma.18G041500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3524244-3526243 Glycine max
Glyma.18G041500 2.0kb downstream 2.0kb downstream 3534 true Chr18: 3526244-3529777 Glycine max
Glyma.18G041500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3527778-3529777 Glycine max
Glyma.18G041500 5.0kb upstream 5.0kb upstream 6534 true Chr18: 3521244-3527777 Glycine max
Glyma.18G041500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3521244-3526243 Glycine max
Glyma.18G041500 5.0kb downstream 5.0kb downstream 6534 true Chr18: 3526244-3532777 Glycine max
Glyma.18G041500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3527778-3532777 Glycine max
Glyma.18G041500 10.0kb upstream 10.0kb upstream 11534 true Chr18: 3516244-3527777 Glycine max
Glyma.18G041500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3516244-3526243 Glycine max
Glyma.18G041500 10.0kb downstream 10.0kb downstream 11534 true Chr18: 3526244-3537777 Glycine max
Glyma.18G041500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3527778-3537777 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314715 5265 Fabidae View MSA
124068266 5270 Rosid View MSA
123738048 5271 Pentapetalae View MSA
122791227 5272 Eudicot View MSA
122046805 5273 Angiosperm View MSA
121351715 5274 Embryophyte View MSA
123426563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.87101 0.0 9.40801    
cufflinks 1.05418 0.0 3.80065    
cufflinks 1.47806 0.0 5.18179    
cufflinks 2.63028 0.0 8.69235    
cufflinks 1.4028 0.0 4.96447    
cufflinks 0.599126 0.0 2.22976   Low
cufflinks 4.2656 0.0 13.2362   High
cufflinks 1.82475 0.0 6.2968    
cufflinks 1.08203 0.0 3.89374    
cufflinks 1.37        
cufflinks 1.582        
cufflinks 1.992       High
cufflinks 1.269        
cufflinks 1.782        
cufflinks 1.282        
cufflinks 1.584        
cufflinks 1.081        
cufflinks 0.825       Low
cufflinks 0.902       Low
cufflinks 1.648        
cufflinks 1.297        
cufflinks 1.829        
cufflinks 1.608        
cufflinks 1.829        
cufflinks 1.781        
cufflinks 0.688       Low

0 Strain