Gene : Glyma.18G028900 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.1.1.148 - Thymidylate synthase (FAD) / Flavin dependent thymidylate synthase Genomic Order:  289
Name:  ? Glyma.18G028900 Secondary Identifier:  ? PAC:30557220
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6545 Glycine max pathologic  
Gmax TRPSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G028900 0.5kb upstream 0.5kb upstream 5955 true Chr18: 2179305-2185259 Glycine max
Glyma.18G028900 0.5kb upstream 0.5kb upstream 500 false Chr18: 2184760-2185259 Glycine max
Glyma.18G028900 0.5kb downstream 0.5kb downstream 5955 true Chr18: 2178805-2184759 Glycine max
Glyma.18G028900 0.5kb downstream 0.5kb downstream 500 false Chr18: 2178805-2179304 Glycine max
Glyma.18G028900 1.0kb upstream 1.0kb upstream 6455 true Chr18: 2179305-2185759 Glycine max
Glyma.18G028900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2184760-2185759 Glycine max
Glyma.18G028900 1.0kb downstream 1.0kb downstream 6455 true Chr18: 2178305-2184759 Glycine max
Glyma.18G028900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2178305-2179304 Glycine max
Glyma.18G028900 2.0kb upstream 2.0kb upstream 7455 true Chr18: 2179305-2186759 Glycine max
Glyma.18G028900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2184760-2186759 Glycine max
Glyma.18G028900 2.0kb downstream 2.0kb downstream 7455 true Chr18: 2177305-2184759 Glycine max
Glyma.18G028900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2177305-2179304 Glycine max
Glyma.18G028900 5.0kb upstream 5.0kb upstream 10455 true Chr18: 2179305-2189759 Glycine max
Glyma.18G028900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2184760-2189759 Glycine max
Glyma.18G028900 5.0kb downstream 5.0kb downstream 10455 true Chr18: 2174305-2184759 Glycine max
Glyma.18G028900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2174305-2179304 Glycine max
Glyma.18G028900 10.0kb upstream 10.0kb upstream 15455 true Chr18: 2179305-2194759 Glycine max
Glyma.18G028900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2184760-2194759 Glycine max
Glyma.18G028900 10.0kb downstream 10.0kb downstream 15455 true Chr18: 2169305-2184759 Glycine max
Glyma.18G028900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2169305-2179304 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310045 5265 Fabidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.779762 0.0 4.69803    
cufflinks 8.02449 0.0 28.7276   High
cufflinks 0.645689 0.0 4.50193   Low
cufflinks 1.74302 0.0 8.66712    
cufflinks 2.36137 0.0 11.7169    
cufflinks 1.22502 0.0 6.47095    
cufflinks 0.933874 0.0 6.22823    
cufflinks 1.33548 0.0 6.78833    
cufflinks 1.81183 0.0 9.72449    
cufflinks 0.448        
cufflinks 0.043     Low Low
cufflinks 0.268        
cufflinks 0.338        
cufflinks 0.371        
cufflinks 0.01     Low Low
cufflinks 2.166       High
cufflinks 0.135        
cufflinks 0.271        
cufflinks 1.32        
cufflinks 1.819       High
cufflinks 0.078        
cufflinks 1.969       High
cufflinks 2.151       High
cufflinks 0.021     Low Low
cufflinks 1.662       High
cufflinks 0.134        

0 Strain