Gene : Glyma.18G029000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22950//PTHR22950:SF260 - AMINO ACID TRANSPORTER Genomic Order:  290
Name:  ? Glyma.18G029000 Secondary Identifier:  ? PAC:30556173
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G029000 0.5kb upstream 0.5kb upstream 6281 true Chr18: 2189117-2195397 Glycine max
Glyma.18G029000 0.5kb upstream 0.5kb upstream 500 false Chr18: 2194898-2195397 Glycine max
Glyma.18G029000 0.5kb downstream 0.5kb downstream 6281 true Chr18: 2188617-2194897 Glycine max
Glyma.18G029000 0.5kb downstream 0.5kb downstream 500 false Chr18: 2188617-2189116 Glycine max
Glyma.18G029000 1.0kb upstream 1.0kb upstream 6781 true Chr18: 2189117-2195897 Glycine max
Glyma.18G029000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2194898-2195897 Glycine max
Glyma.18G029000 1.0kb downstream 1.0kb downstream 6781 true Chr18: 2188117-2194897 Glycine max
Glyma.18G029000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2188117-2189116 Glycine max
Glyma.18G029000 2.0kb upstream 2.0kb upstream 7781 true Chr18: 2189117-2196897 Glycine max
Glyma.18G029000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2194898-2196897 Glycine max
Glyma.18G029000 2.0kb downstream 2.0kb downstream 7781 true Chr18: 2187117-2194897 Glycine max
Glyma.18G029000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2187117-2189116 Glycine max
Glyma.18G029000 5.0kb upstream 5.0kb upstream 10781 true Chr18: 2189117-2199897 Glycine max
Glyma.18G029000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2194898-2199897 Glycine max
Glyma.18G029000 5.0kb downstream 5.0kb downstream 10781 true Chr18: 2184117-2194897 Glycine max
Glyma.18G029000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2184117-2189116 Glycine max
Glyma.18G029000 10.0kb upstream 10.0kb upstream 15781 true Chr18: 2189117-2204897 Glycine max
Glyma.18G029000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2194898-2204897 Glycine max
Glyma.18G029000 10.0kb downstream 10.0kb downstream 15781 true Chr18: 2179117-2194897 Glycine max
Glyma.18G029000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2179117-2189116 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314633 5265 Fabidae View MSA
124073275 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083303 0.0 0.329862 Low Low
cufflinks 1.68279 0.0 5.52426    
cufflinks 3.57381 0.0 10.5399    
cufflinks 14.1337 0.0 37.7119   High
cufflinks 2.48125 0.0 7.70966    
cufflinks 1.70816 0.0 5.58872    
cufflinks 10.6108 0.0 28.4695    
cufflinks 6.45108 0.0 17.8124    
cufflinks 3.94448 0.0 11.4805    
cufflinks 0.497        
cufflinks 0.25        
cufflinks 0.738       High
cufflinks 0.767       High
cufflinks 0.218        
cufflinks 0.04     Low Low
cufflinks 0.25        
cufflinks 0.83       High
cufflinks 0.142        
cufflinks 0.837       High
cufflinks 0.144        
cufflinks 0.49        
cufflinks 0.215        
cufflinks 0.351        
cufflinks 0.288        
cufflinks 0.206        
cufflinks 0.618        

0 Strain