Gene : Glyma.18G029500 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG2975 - Translation initiation factor 3, subunit f (eIF-3f) Genomic Order:  295
Name:  ? Glyma.18G029500 Secondary Identifier:  ? PAC:30558695
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G029500 0.5kb upstream 0.5kb upstream 4085 true Chr18: 2232319-2236403 Glycine max
Glyma.18G029500 0.5kb upstream 0.5kb upstream 500 false Chr18: 2232319-2232818 Glycine max
Glyma.18G029500 0.5kb downstream 0.5kb downstream 4085 true Chr18: 2232819-2236903 Glycine max
Glyma.18G029500 0.5kb downstream 0.5kb downstream 500 false Chr18: 2236404-2236903 Glycine max
Glyma.18G029500 1.0kb upstream 1.0kb upstream 4585 true Chr18: 2231819-2236403 Glycine max
Glyma.18G029500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2231819-2232818 Glycine max
Glyma.18G029500 1.0kb downstream 1.0kb downstream 4585 true Chr18: 2232819-2237403 Glycine max
Glyma.18G029500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2236404-2237403 Glycine max
Glyma.18G029500 2.0kb upstream 2.0kb upstream 5585 true Chr18: 2230819-2236403 Glycine max
Glyma.18G029500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2230819-2232818 Glycine max
Glyma.18G029500 2.0kb downstream 2.0kb downstream 5585 true Chr18: 2232819-2238403 Glycine max
Glyma.18G029500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2236404-2238403 Glycine max
Glyma.18G029500 5.0kb upstream 5.0kb upstream 8585 true Chr18: 2227819-2236403 Glycine max
Glyma.18G029500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2227819-2232818 Glycine max
Glyma.18G029500 5.0kb downstream 5.0kb downstream 8585 true Chr18: 2232819-2241403 Glycine max
Glyma.18G029500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2236404-2241403 Glycine max
Glyma.18G029500 10.0kb upstream 10.0kb upstream 13585 true Chr18: 2222819-2236403 Glycine max
Glyma.18G029500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2222819-2232818 Glycine max
Glyma.18G029500 10.0kb downstream 10.0kb downstream 13585 true Chr18: 2232819-2246403 Glycine max
Glyma.18G029500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2236404-2246403 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308957 5265 Fabidae View MSA
124064215 5270 Rosid View MSA
123739759 5271 Pentapetalae View MSA
122793083 5272 Eudicot View MSA
122044125 5273 Angiosperm View MSA
121349154 5274 Embryophyte View MSA
123428358 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.7423 0.0 146.505 High  
cufflinks 64.4962 0.0 178.601 High  
cufflinks 39.1262 0.0 104.975 High Low
cufflinks 57.0924 0.0 156.292 High  
cufflinks 78.1045 0.0 220.559 High High
cufflinks 47.1132 0.0 127.461 High  
cufflinks 98.571 0.0 285.534 High High
cufflinks 49.6884 0.0 134.83 High  
cufflinks 61.2479 0.0 168.785 High  
cufflinks 17.205     High  
cufflinks 6.224     High Low
cufflinks 14.636     High  
cufflinks 23.882     High High
cufflinks 33.189     High High
cufflinks 8.594     High Low
cufflinks 18.206     High  
cufflinks 9.907     High  
cufflinks 17.93     High  
cufflinks 19.907     High  
cufflinks 19.751     High  
cufflinks 9.999     High  
cufflinks 18.01     High  
cufflinks 17.401     High  
cufflinks 7.211     High Low
cufflinks 19.136     High  
cufflinks 10.666     High  

0 Strain