Gene : Glyma.18G029300 G. max Wm82.a2.v1
Defline:  (1 of 4) PF07014 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) Genomic Order:  293
Name:  ? Glyma.18G029300 Secondary Identifier:  ? PAC:30554962
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G029300 0.5kb upstream 0.5kb upstream 2604 true Chr18: 2220706-2223309 Glycine max
Glyma.18G029300 0.5kb upstream 0.5kb upstream 500 false Chr18: 2220706-2221205 Glycine max
Glyma.18G029300 0.5kb downstream 0.5kb downstream 2604 true Chr18: 2221206-2223809 Glycine max
Glyma.18G029300 0.5kb downstream 0.5kb downstream 500 false Chr18: 2223310-2223809 Glycine max
Glyma.18G029300 1.0kb upstream 1.0kb upstream 3104 true Chr18: 2220206-2223309 Glycine max
Glyma.18G029300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2220206-2221205 Glycine max
Glyma.18G029300 1.0kb downstream 1.0kb downstream 3104 true Chr18: 2221206-2224309 Glycine max
Glyma.18G029300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2223310-2224309 Glycine max
Glyma.18G029300 2.0kb upstream 2.0kb upstream 4104 true Chr18: 2219206-2223309 Glycine max
Glyma.18G029300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2219206-2221205 Glycine max
Glyma.18G029300 2.0kb downstream 2.0kb downstream 4104 true Chr18: 2221206-2225309 Glycine max
Glyma.18G029300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2223310-2225309 Glycine max
Glyma.18G029300 5.0kb upstream 5.0kb upstream 7104 true Chr18: 2216206-2223309 Glycine max
Glyma.18G029300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2216206-2221205 Glycine max
Glyma.18G029300 5.0kb downstream 5.0kb downstream 7104 true Chr18: 2221206-2228309 Glycine max
Glyma.18G029300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2223310-2228309 Glycine max
Glyma.18G029300 10.0kb upstream 10.0kb upstream 12104 true Chr18: 2211206-2223309 Glycine max
Glyma.18G029300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2211206-2221205 Glycine max
Glyma.18G029300 10.0kb downstream 10.0kb downstream 12104 true Chr18: 2221206-2233309 Glycine max
Glyma.18G029300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2223310-2233309 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306387 5265 Fabidae View MSA
124067891 5270 Rosid View MSA
123747109 5271 Pentapetalae View MSA
122789570 5272 Eudicot View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.3562 0.0 95.567 High High
cufflinks 2.03075 0.0 6.4851    
cufflinks 42.3218 0.0 119.509 High High
cufflinks 4.76979 0.0 13.5497    
cufflinks 8.8154 0.0 23.7633    
cufflinks 13.4454 0.0 35.8788    
cufflinks 1.12137 0.0 3.84595   Low
cufflinks 1.81165 0.0 5.86195   Low
cufflinks 7.90779 0.0 21.4805    
cufflinks 27.286     High  
cufflinks 370.85     High High
cufflinks 51.926     High  
cufflinks 16.614     High  
cufflinks 3.7       Low
cufflinks 284.498     High High
cufflinks 16.552     High  
cufflinks 351.149     High High
cufflinks 10.62     High  
cufflinks 2.65       Low
cufflinks 11.694     High  
cufflinks 353.46     High High
cufflinks 7.799     High  
cufflinks 4.166       Low
cufflinks 228.911     High High
cufflinks 9.355     High  
cufflinks 401.222     High High

0 Strain