Gene : Glyma.18G030200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24006:SF428 - CORONATINE-INSENSITIVE PROTEIN 1 Genomic Order:  302
Name:  ? Glyma.18G030200 Secondary Identifier:  ? PAC:30556017
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G030200 0.5kb upstream 0.5kb upstream 4663 true Chr18: 2321431-2326093 Glycine max
Glyma.18G030200 0.5kb upstream 0.5kb upstream 500 false Chr18: 2321431-2321930 Glycine max
Glyma.18G030200 0.5kb downstream 0.5kb downstream 4663 true Chr18: 2321931-2326593 Glycine max
Glyma.18G030200 0.5kb downstream 0.5kb downstream 500 false Chr18: 2326094-2326593 Glycine max
Glyma.18G030200 1.0kb upstream 1.0kb upstream 5163 true Chr18: 2320931-2326093 Glycine max
Glyma.18G030200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2320931-2321930 Glycine max
Glyma.18G030200 1.0kb downstream 1.0kb downstream 5163 true Chr18: 2321931-2327093 Glycine max
Glyma.18G030200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2326094-2327093 Glycine max
Glyma.18G030200 2.0kb upstream 2.0kb upstream 6163 true Chr18: 2319931-2326093 Glycine max
Glyma.18G030200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2319931-2321930 Glycine max
Glyma.18G030200 2.0kb downstream 2.0kb downstream 6163 true Chr18: 2321931-2328093 Glycine max
Glyma.18G030200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2326094-2328093 Glycine max
Glyma.18G030200 5.0kb upstream 5.0kb upstream 9163 true Chr18: 2316931-2326093 Glycine max
Glyma.18G030200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2316931-2321930 Glycine max
Glyma.18G030200 5.0kb downstream 5.0kb downstream 9163 true Chr18: 2321931-2331093 Glycine max
Glyma.18G030200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2326094-2331093 Glycine max
Glyma.18G030200 10.0kb upstream 10.0kb upstream 14163 true Chr18: 2311931-2326093 Glycine max
Glyma.18G030200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2311931-2321930 Glycine max
Glyma.18G030200 10.0kb downstream 10.0kb downstream 14163 true Chr18: 2321931-2336093 Glycine max
Glyma.18G030200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2326094-2336093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313234 5265 Fabidae View MSA
124062956 5270 Rosid View MSA
123749708 5271 Pentapetalae View MSA
122790201 5272 Eudicot View MSA
122042626 5273 Angiosperm View MSA
121349676 5274 Embryophyte View MSA
123381396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.3927 0.0 101.937 High High
cufflinks 7.18994 0.0 19.6397    
cufflinks 7.52391 0.0 20.4782    
cufflinks 13.8928 0.0 37.065    
cufflinks 20.1881 0.0 54.2466 High  
cufflinks 14.4174 0.0 38.4659    
cufflinks 3.49681 0.0 10.2869   Low
cufflinks 8.33295 0.0 22.5514    
cufflinks 23.0682 0.0 62.3705 High  
cufflinks 3.468       Low
cufflinks 11.763     High  
cufflinks 5.1        
cufflinks 6.636        
cufflinks 5.909        
cufflinks 9.814     High  
cufflinks 7.595     High  
cufflinks 3.124       Low
cufflinks 7.198        
cufflinks 5.451        
cufflinks 9.185     High  
cufflinks 23.657     High High
cufflinks 8.066     High  
cufflinks 3.146       Low
cufflinks 19.143     High High
cufflinks 7.24     High  
cufflinks 6.899     High  

0 Strain