Gene : Glyma.18G030300 G. max Wm82.a2.v1
Defline:  (1 of 14) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  303
Name:  ? Glyma.18G030300 Secondary Identifier:  ? PAC:30556447
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G030300 0.5kb upstream 0.5kb upstream 2899 true Chr18: 2329648-2332546 Glycine max
Glyma.18G030300 0.5kb upstream 0.5kb upstream 500 false Chr18: 2332047-2332546 Glycine max
Glyma.18G030300 0.5kb downstream 0.5kb downstream 2899 true Chr18: 2329148-2332046 Glycine max
Glyma.18G030300 0.5kb downstream 0.5kb downstream 500 false Chr18: 2329148-2329647 Glycine max
Glyma.18G030300 1.0kb upstream 1.0kb upstream 3399 true Chr18: 2329648-2333046 Glycine max
Glyma.18G030300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2332047-2333046 Glycine max
Glyma.18G030300 1.0kb downstream 1.0kb downstream 3399 true Chr18: 2328648-2332046 Glycine max
Glyma.18G030300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2328648-2329647 Glycine max
Glyma.18G030300 2.0kb upstream 2.0kb upstream 4399 true Chr18: 2329648-2334046 Glycine max
Glyma.18G030300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2332047-2334046 Glycine max
Glyma.18G030300 2.0kb downstream 2.0kb downstream 4399 true Chr18: 2327648-2332046 Glycine max
Glyma.18G030300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2327648-2329647 Glycine max
Glyma.18G030300 5.0kb upstream 5.0kb upstream 7399 true Chr18: 2329648-2337046 Glycine max
Glyma.18G030300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2332047-2337046 Glycine max
Glyma.18G030300 5.0kb downstream 5.0kb downstream 7399 true Chr18: 2324648-2332046 Glycine max
Glyma.18G030300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2324648-2329647 Glycine max
Glyma.18G030300 10.0kb upstream 10.0kb upstream 12399 true Chr18: 2329648-2342046 Glycine max
Glyma.18G030300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2332047-2342046 Glycine max
Glyma.18G030300 10.0kb downstream 10.0kb downstream 12399 true Chr18: 2319648-2332046 Glycine max
Glyma.18G030300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2319648-2329647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792864 5273 Angiosperm View MSA
122253648 5265 Fabidae View MSA
123996161 5270 Rosid View MSA
123746723 5271 Pentapetalae View MSA
122798692 5272 Eudicot View MSA
121064059 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.51831 0.0 13.683    
cufflinks 3.4533 0.0 16.769    
cufflinks 0.729142 0.0 4.38681    
cufflinks 1.56107 0.0 9.75045    
cufflinks 2.29061 0.0 12.9215    
cufflinks 0.163488 0.0 0.641166 Low Low
cufflinks 0.311016 0.0 1.4913   Low
cufflinks 12.0748 0.0 42.5298   High
cufflinks 6.76848 0.0 26.6731   High
cufflinks 1.232        
cufflinks 0.51        
cufflinks 0.493        
cufflinks 0.298       Low
cufflinks 0.249       Low
cufflinks 0.26       Low
cufflinks 1.175        
cufflinks 0.295       Low
cufflinks 0.976        
cufflinks 0.955        
cufflinks 0.939        
cufflinks 1.525       High
cufflinks 1.12        
cufflinks 0.517        
cufflinks 1.906       High
cufflinks 0.866        
cufflinks 0.517        

0 Strain