Gene : Glyma.18G034700 G. max Wm82.a2.v1
Defline:  (1 of 24) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  347
Name:  ? Glyma.18G034700 Secondary Identifier:  ? PAC:30558287
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G034700 0.5kb upstream 0.5kb upstream 6311 true Chr18: 2689881-2696191 Glycine max
Glyma.18G034700 0.5kb upstream 0.5kb upstream 500 false Chr18: 2695692-2696191 Glycine max
Glyma.18G034700 0.5kb downstream 0.5kb downstream 6311 true Chr18: 2689381-2695691 Glycine max
Glyma.18G034700 0.5kb downstream 0.5kb downstream 500 false Chr18: 2689381-2689880 Glycine max
Glyma.18G034700 1.0kb upstream 1.0kb upstream 6811 true Chr18: 2689881-2696691 Glycine max
Glyma.18G034700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2695692-2696691 Glycine max
Glyma.18G034700 1.0kb downstream 1.0kb downstream 6811 true Chr18: 2688881-2695691 Glycine max
Glyma.18G034700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2688881-2689880 Glycine max
Glyma.18G034700 2.0kb upstream 2.0kb upstream 7811 true Chr18: 2689881-2697691 Glycine max
Glyma.18G034700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2695692-2697691 Glycine max
Glyma.18G034700 2.0kb downstream 2.0kb downstream 7811 true Chr18: 2687881-2695691 Glycine max
Glyma.18G034700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2687881-2689880 Glycine max
Glyma.18G034700 5.0kb upstream 5.0kb upstream 10811 true Chr18: 2689881-2700691 Glycine max
Glyma.18G034700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2695692-2700691 Glycine max
Glyma.18G034700 5.0kb downstream 5.0kb downstream 10811 true Chr18: 2684881-2695691 Glycine max
Glyma.18G034700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2684881-2689880 Glycine max
Glyma.18G034700 10.0kb upstream 10.0kb upstream 15811 true Chr18: 2689881-2705691 Glycine max
Glyma.18G034700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2695692-2705691 Glycine max
Glyma.18G034700 10.0kb downstream 10.0kb downstream 15811 true Chr18: 2679881-2695691 Glycine max
Glyma.18G034700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2679881-2689880 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302380 5265 Fabidae View MSA
124067475 5270 Rosid View MSA
123739002 5271 Pentapetalae View MSA
122796766 5272 Eudicot View MSA
122042496 5273 Angiosperm View MSA
121309979 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.556 0.0 101.699 High  
cufflinks 14.9307 0.0 67.3245    
cufflinks 30.3193 0.0 145.112 High High
cufflinks 15.8475 0.0 68.6103    
cufflinks 16.312 0.0 69.5821    
cufflinks 17.4013 0.0 75.8935    
cufflinks 26.8879 0.0 120.045 High High
cufflinks 15.8921 0.0 67.1898    
cufflinks 16.1156 0.0 68.5109    
cufflinks 0.716       Low
cufflinks 1.833       High
cufflinks 1.313        
cufflinks 0.693       Low
cufflinks 0.645       Low
cufflinks 1.625        
cufflinks 1.112        
cufflinks 1.254        
cufflinks 0.953        
cufflinks 1.036        
cufflinks 1.251        
cufflinks 1.525        
cufflinks 1.228        
cufflinks 1.013        
cufflinks 1.995       High
cufflinks 1.131        
cufflinks 1.588        

0 Strain