Gene : Glyma.18G034900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12271:SF40 - POLY(A) RNA POLYMERASE GLD2 Genomic Order:  349
Name:  ? Glyma.18G034900 Secondary Identifier:  ? PAC:30555733
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G034900 0.5kb upstream 0.5kb upstream 8657 true Chr18: 2709490-2718146 Glycine max
Glyma.18G034900 0.5kb upstream 0.5kb upstream 500 false Chr18: 2709490-2709989 Glycine max
Glyma.18G034900 0.5kb downstream 0.5kb downstream 8657 true Chr18: 2709990-2718646 Glycine max
Glyma.18G034900 0.5kb downstream 0.5kb downstream 500 false Chr18: 2718147-2718646 Glycine max
Glyma.18G034900 1.0kb upstream 1.0kb upstream 9157 true Chr18: 2708990-2718146 Glycine max
Glyma.18G034900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2708990-2709989 Glycine max
Glyma.18G034900 1.0kb downstream 1.0kb downstream 9157 true Chr18: 2709990-2719146 Glycine max
Glyma.18G034900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2718147-2719146 Glycine max
Glyma.18G034900 2.0kb upstream 2.0kb upstream 10157 true Chr18: 2707990-2718146 Glycine max
Glyma.18G034900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2707990-2709989 Glycine max
Glyma.18G034900 2.0kb downstream 2.0kb downstream 10157 true Chr18: 2709990-2720146 Glycine max
Glyma.18G034900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2718147-2720146 Glycine max
Glyma.18G034900 5.0kb upstream 5.0kb upstream 13157 true Chr18: 2704990-2718146 Glycine max
Glyma.18G034900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2704990-2709989 Glycine max
Glyma.18G034900 5.0kb downstream 5.0kb downstream 13157 true Chr18: 2709990-2723146 Glycine max
Glyma.18G034900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2718147-2723146 Glycine max
Glyma.18G034900 10.0kb upstream 10.0kb upstream 18157 true Chr18: 2699990-2718146 Glycine max
Glyma.18G034900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2699990-2709989 Glycine max
Glyma.18G034900 10.0kb downstream 10.0kb downstream 18157 true Chr18: 2709990-2728146 Glycine max
Glyma.18G034900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2718147-2728146 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302275 5265 Fabidae View MSA
124063815 5270 Rosid View MSA
123736684 5271 Pentapetalae View MSA
122788998 5272 Eudicot View MSA
122048124 5273 Angiosperm View MSA
121349323 5274 Embryophyte View MSA
123428586 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.807314 0.0 4.81279   Low
cufflinks 5.34535 0.0 29.7174    
cufflinks 2.61508 0.0 18.7811    
cufflinks 5.23724 0.0 27.8243    
cufflinks 3.69822 0.0 23.6648    
cufflinks 1.85054 0.0 13.468    
cufflinks 4.805 0.0 31.3022    
cufflinks 6.50148 0.0 35.0707    
cufflinks 8.49226 0.0 42.4148   High
cufflinks 0.118        
cufflinks 0.04     Low Low
cufflinks 0.135       High
cufflinks 0.117        
cufflinks 0.095        
cufflinks 0.106        
cufflinks 0.056     Low  
cufflinks 0.081        
cufflinks 0.207       High
cufflinks 0.166       High
cufflinks 0.066     Low  
cufflinks 0.029     Low Low
cufflinks 0.074     Low  
cufflinks 0.076     Low  
cufflinks 0.044     Low Low
cufflinks 0.071     Low  
cufflinks 0.039     Low Low

0 Strain