Gene : Glyma.18G035300 G. max Wm82.a2.v1
Defline:  (1 of 6) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  353
Name:  ? Glyma.18G035300 Secondary Identifier:  ? PAC:30555616
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G035300 0.5kb upstream 0.5kb upstream 3937 true Chr18: 2754493-2758429 Glycine max
Glyma.18G035300 0.5kb upstream 0.5kb upstream 500 false Chr18: 2754493-2754992 Glycine max
Glyma.18G035300 0.5kb downstream 0.5kb downstream 3937 true Chr18: 2754993-2758929 Glycine max
Glyma.18G035300 0.5kb downstream 0.5kb downstream 500 false Chr18: 2758430-2758929 Glycine max
Glyma.18G035300 1.0kb upstream 1.0kb upstream 4437 true Chr18: 2753993-2758429 Glycine max
Glyma.18G035300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2753993-2754992 Glycine max
Glyma.18G035300 1.0kb downstream 1.0kb downstream 4437 true Chr18: 2754993-2759429 Glycine max
Glyma.18G035300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2758430-2759429 Glycine max
Glyma.18G035300 2.0kb upstream 2.0kb upstream 5437 true Chr18: 2752993-2758429 Glycine max
Glyma.18G035300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2752993-2754992 Glycine max
Glyma.18G035300 2.0kb downstream 2.0kb downstream 5437 true Chr18: 2754993-2760429 Glycine max
Glyma.18G035300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2758430-2760429 Glycine max
Glyma.18G035300 5.0kb upstream 5.0kb upstream 8437 true Chr18: 2749993-2758429 Glycine max
Glyma.18G035300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2749993-2754992 Glycine max
Glyma.18G035300 5.0kb downstream 5.0kb downstream 8437 true Chr18: 2754993-2763429 Glycine max
Glyma.18G035300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2758430-2763429 Glycine max
Glyma.18G035300 10.0kb upstream 10.0kb upstream 13437 true Chr18: 2744993-2758429 Glycine max
Glyma.18G035300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2744993-2754992 Glycine max
Glyma.18G035300 10.0kb downstream 10.0kb downstream 13437 true Chr18: 2754993-2768429 Glycine max
Glyma.18G035300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2758430-2768429 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305033 5265 Fabidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4211 0.0 52.8771   High
cufflinks 24.2256 0.0 90.4701 High High
cufflinks 6.67841 0.0 31.3086    
cufflinks 8.34422 0.0 36.1302    
cufflinks 2.86654 0.0 18.2924    
cufflinks 1.99049 0.0 7.71366   Low
cufflinks 5.15084 0.0 23.1451    
cufflinks 3.37734 0.0 19.5345    
cufflinks 1.49746 0.0 11.2946   Low
cufflinks 1.518        
cufflinks 0.037     Low Low
cufflinks 1.584        
cufflinks 0.088     Low  
cufflinks 0.146        
cufflinks 0.189        
cufflinks 8.427     High High
cufflinks 0.039     Low Low
cufflinks 2.534        
cufflinks 2.642        
cufflinks 10.736     High High
cufflinks 0.049     Low Low
cufflinks 8.97     High High
cufflinks 6.382       High
cufflinks 0.044     Low Low
cufflinks 9.868     High High
cufflinks 0.072        

0 Strain