Gene : Glyma.18G090200 G. max Wm82.a2.v1
Defline:  (1 of 15) PF02892//PF04937 - BED zinc finger (zf-BED) // Protein of unknown function (DUF 659) (DUF659) Genomic Order:  902
Name:  ? Glyma.18G090200 Secondary Identifier:  ? PAC:30558030
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G090200 0.5kb upstream 0.5kb upstream 2392 true Chr18: 8946268-8948659 Glycine max
Glyma.18G090200 0.5kb upstream 0.5kb upstream 500 false Chr18: 8948160-8948659 Glycine max
Glyma.18G090200 0.5kb downstream 0.5kb downstream 2392 true Chr18: 8945768-8948159 Glycine max
Glyma.18G090200 0.5kb downstream 0.5kb downstream 500 false Chr18: 8945768-8946267 Glycine max
Glyma.18G090200 1.0kb upstream 1.0kb upstream 2892 true Chr18: 8946268-8949159 Glycine max
Glyma.18G090200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 8948160-8949159 Glycine max
Glyma.18G090200 1.0kb downstream 1.0kb downstream 2892 true Chr18: 8945268-8948159 Glycine max
Glyma.18G090200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 8945268-8946267 Glycine max
Glyma.18G090200 2.0kb upstream 2.0kb upstream 3892 true Chr18: 8946268-8950159 Glycine max
Glyma.18G090200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 8948160-8950159 Glycine max
Glyma.18G090200 2.0kb downstream 2.0kb downstream 3892 true Chr18: 8944268-8948159 Glycine max
Glyma.18G090200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 8944268-8946267 Glycine max
Glyma.18G090200 5.0kb upstream 5.0kb upstream 6892 true Chr18: 8946268-8953159 Glycine max
Glyma.18G090200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 8948160-8953159 Glycine max
Glyma.18G090200 5.0kb downstream 5.0kb downstream 6892 true Chr18: 8941268-8948159 Glycine max
Glyma.18G090200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 8941268-8946267 Glycine max
Glyma.18G090200 10.0kb upstream 10.0kb upstream 11892 true Chr18: 8946268-8958159 Glycine max
Glyma.18G090200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 8948160-8958159 Glycine max
Glyma.18G090200 10.0kb downstream 10.0kb downstream 11892 true Chr18: 8936268-8948159 Glycine max
Glyma.18G090200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 8936268-8946267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314742 5265 Fabidae View MSA
124040304 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0503989 0.0 0.207104 Low  
cufflinks 0.112847 0.0 0.447505 Low  
cufflinks 0.284882 0.0 1.08584   High
cufflinks 0.0672887 0.0 0.272167 Low  
cufflinks 0.0664049 0.0 0.269436 Low  
cufflinks 0.0797594 0.0 0.320744 Low  
cufflinks 0.0301929 0.0 0.128794 Low Low
cufflinks 0.057542 0.0 0.234509 Low  
cufflinks 0.058301 0.0 0.23752 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.092     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain