Gene : Glyma.18G092500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10146 - PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN Genomic Order:  925
Name:  ? Glyma.18G092500 Secondary Identifier:  ? PAC:30558552
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G092500 0.5kb upstream 0.5kb upstream 4549 true Chr18: 9297073-9301621 Glycine max
Glyma.18G092500 0.5kb upstream 0.5kb upstream 500 false Chr18: 9297073-9297572 Glycine max
Glyma.18G092500 0.5kb downstream 0.5kb downstream 4549 true Chr18: 9297573-9302121 Glycine max
Glyma.18G092500 0.5kb downstream 0.5kb downstream 500 false Chr18: 9301622-9302121 Glycine max
Glyma.18G092500 1.0kb upstream 1.0kb upstream 5049 true Chr18: 9296573-9301621 Glycine max
Glyma.18G092500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 9296573-9297572 Glycine max
Glyma.18G092500 1.0kb downstream 1.0kb downstream 5049 true Chr18: 9297573-9302621 Glycine max
Glyma.18G092500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 9301622-9302621 Glycine max
Glyma.18G092500 2.0kb upstream 2.0kb upstream 6049 true Chr18: 9295573-9301621 Glycine max
Glyma.18G092500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 9295573-9297572 Glycine max
Glyma.18G092500 2.0kb downstream 2.0kb downstream 6049 true Chr18: 9297573-9303621 Glycine max
Glyma.18G092500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 9301622-9303621 Glycine max
Glyma.18G092500 5.0kb upstream 5.0kb upstream 9049 true Chr18: 9292573-9301621 Glycine max
Glyma.18G092500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 9292573-9297572 Glycine max
Glyma.18G092500 5.0kb downstream 5.0kb downstream 9049 true Chr18: 9297573-9306621 Glycine max
Glyma.18G092500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 9301622-9306621 Glycine max
Glyma.18G092500 10.0kb upstream 10.0kb upstream 14049 true Chr18: 9287573-9301621 Glycine max
Glyma.18G092500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 9287573-9297572 Glycine max
Glyma.18G092500 10.0kb downstream 10.0kb downstream 14049 true Chr18: 9297573-9311621 Glycine max
Glyma.18G092500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 9301622-9311621 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307915 5265 Fabidae View MSA
124066747 5270 Rosid View MSA
123741353 5271 Pentapetalae View MSA
122795077 5272 Eudicot View MSA
122042316 5273 Angiosperm View MSA
121344237 5274 Embryophyte View MSA
123424021 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.9515 0.0 135.894 High High
cufflinks 13.8223 0.0 37.7697    
cufflinks 23.1379 0.0 61.8382 High  
cufflinks 22.379 0.0 59.8177 High  
cufflinks 10.7591 0.0 29.9106    
cufflinks 12.2394 0.0 33.7002    
cufflinks 10.8271 0.0 30.1597    
cufflinks 20.1967 0.0 54.1273    
cufflinks 10.536 0.0 29.3974    
cufflinks 3.81        
cufflinks 4.916        
cufflinks 4.258        
cufflinks 2.055       Low
cufflinks 2.672       Low
cufflinks 4.747        
cufflinks 5.39        
cufflinks 1.766       Low
cufflinks 4.033        
cufflinks 4.295        
cufflinks 5.358        
cufflinks 4.457        
cufflinks 5.51       High
cufflinks 4.156        
cufflinks 3.726        
cufflinks 5.568       High
cufflinks 3.132        

0 Strain