Gene : Glyma.18G092800 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  928
Name:  ? Glyma.18G092800 Secondary Identifier:  ? PAC:30555261
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G092800 0.5kb upstream 0.5kb upstream 1856 true Chr18: 9340845-9342700 Glycine max
Glyma.18G092800 0.5kb upstream 0.5kb upstream 500 false Chr18: 9342201-9342700 Glycine max
Glyma.18G092800 0.5kb downstream 0.5kb downstream 1856 true Chr18: 9340345-9342200 Glycine max
Glyma.18G092800 0.5kb downstream 0.5kb downstream 500 false Chr18: 9340345-9340844 Glycine max
Glyma.18G092800 1.0kb upstream 1.0kb upstream 2356 true Chr18: 9340845-9343200 Glycine max
Glyma.18G092800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 9342201-9343200 Glycine max
Glyma.18G092800 1.0kb downstream 1.0kb downstream 2356 true Chr18: 9339845-9342200 Glycine max
Glyma.18G092800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 9339845-9340844 Glycine max
Glyma.18G092800 2.0kb upstream 2.0kb upstream 3356 true Chr18: 9340845-9344200 Glycine max
Glyma.18G092800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 9342201-9344200 Glycine max
Glyma.18G092800 2.0kb downstream 2.0kb downstream 3356 true Chr18: 9338845-9342200 Glycine max
Glyma.18G092800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 9338845-9340844 Glycine max
Glyma.18G092800 5.0kb upstream 5.0kb upstream 6356 true Chr18: 9340845-9347200 Glycine max
Glyma.18G092800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 9342201-9347200 Glycine max
Glyma.18G092800 5.0kb downstream 5.0kb downstream 6356 true Chr18: 9335845-9342200 Glycine max
Glyma.18G092800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 9335845-9340844 Glycine max
Glyma.18G092800 10.0kb upstream 10.0kb upstream 11356 true Chr18: 9340845-9352200 Glycine max
Glyma.18G092800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 9342201-9352200 Glycine max
Glyma.18G092800 10.0kb downstream 10.0kb downstream 11356 true Chr18: 9330845-9342200 Glycine max
Glyma.18G092800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 9330845-9340844 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313884 5265 Fabidae View MSA
124070125 5270 Rosid View MSA
123742485 5271 Pentapetalae View MSA
122795207 5272 Eudicot View MSA
122049562 5273 Angiosperm View MSA
121311476 5274 Embryophyte View MSA
123348769 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.06358 0.0 25.928   High
cufflinks 3.85231 0.0 12.3155    
cufflinks 6.17791 0.0 18.4112    
cufflinks 8.79526 0.0 25.1089   High
cufflinks 1.03612 0.0 3.78218    
cufflinks 0.552763 0.0 2.08011   Low
cufflinks 3.52299 0.0 11.4867    
cufflinks 1.50962 0.0 5.35088    
cufflinks 0.861024 0.0 3.16827   Low
cufflinks 1.674        
cufflinks 0.411        
cufflinks 3.55        
cufflinks 0.536        
cufflinks 0.304        
cufflinks 0.053       Low
cufflinks 4.963       High
cufflinks 0.108       Low
cufflinks 1.105        
cufflinks 1.88        
cufflinks 3.793        
cufflinks 0.349        
cufflinks 5.044       High
cufflinks 7.311       High
cufflinks 0.546        
cufflinks 5.585       High
cufflinks 0.21       Low

0 Strain