Gene : Glyma.18G093200 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00117//PF00977 - Glutamine amidotransferase class-I (GATase) // Histidine biosynthesis protein (His_biosynth) Genomic Order:  932
Name:  ? Glyma.18G093200 Secondary Identifier:  ? PAC:30556743
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G093200 0.5kb upstream 0.5kb upstream 14596 true Chr18: 9396300-9410895 Glycine max
Glyma.18G093200 0.5kb upstream 0.5kb upstream 500 false Chr18: 9396300-9396799 Glycine max
Glyma.18G093200 0.5kb downstream 0.5kb downstream 14596 true Chr18: 9396800-9411395 Glycine max
Glyma.18G093200 0.5kb downstream 0.5kb downstream 500 false Chr18: 9410896-9411395 Glycine max
Glyma.18G093200 1.0kb upstream 1.0kb upstream 15096 true Chr18: 9395800-9410895 Glycine max
Glyma.18G093200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 9395800-9396799 Glycine max
Glyma.18G093200 1.0kb downstream 1.0kb downstream 15096 true Chr18: 9396800-9411895 Glycine max
Glyma.18G093200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 9410896-9411895 Glycine max
Glyma.18G093200 2.0kb upstream 2.0kb upstream 16096 true Chr18: 9394800-9410895 Glycine max
Glyma.18G093200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 9394800-9396799 Glycine max
Glyma.18G093200 2.0kb downstream 2.0kb downstream 16096 true Chr18: 9396800-9412895 Glycine max
Glyma.18G093200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 9410896-9412895 Glycine max
Glyma.18G093200 5.0kb upstream 5.0kb upstream 19096 true Chr18: 9391800-9410895 Glycine max
Glyma.18G093200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 9391800-9396799 Glycine max
Glyma.18G093200 5.0kb downstream 5.0kb downstream 19096 true Chr18: 9396800-9415895 Glycine max
Glyma.18G093200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 9410896-9415895 Glycine max
Glyma.18G093200 10.0kb upstream 10.0kb upstream 24096 true Chr18: 9386800-9410895 Glycine max
Glyma.18G093200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 9386800-9396799 Glycine max
Glyma.18G093200 10.0kb downstream 10.0kb downstream 24096 true Chr18: 9396800-9420895 Glycine max
Glyma.18G093200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 9410896-9420895 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306975 5265 Fabidae View MSA
124066754 5270 Rosid View MSA
123743623 5271 Pentapetalae View MSA
122792259 5272 Eudicot View MSA
122046043 5273 Angiosperm View MSA
121347063 5274 Embryophyte View MSA
123424776 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4443 0.0 49.3553   High
cufflinks 12.2835 0.0 32.8167    
cufflinks 6.50443 0.0 17.8726   Low
cufflinks 10.9034 0.0 29.2044    
cufflinks 17.6232 0.0 47.0985    
cufflinks 9.0904 0.0 24.5223    
cufflinks 18.2526 0.0 48.8127   High
cufflinks 8.93721 0.0 24.1205    
cufflinks 14.2626 0.0 38.0511    
cufflinks 1.1        
cufflinks 2.418       High
cufflinks 1.276        
cufflinks 2.395       High
cufflinks 3.398       High
cufflinks 2.712       High
cufflinks 1.106        
cufflinks 0.736       Low
cufflinks 1.574        
cufflinks 1.585        
cufflinks 1.061        
cufflinks 2.606       High
cufflinks 1.003        
cufflinks 1.07        
cufflinks 1.18        
cufflinks 1.012        
cufflinks 1.146        

0 Strain