Gene : Glyma.18G075300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11800:SF13 - DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1 Genomic Order:  753
Name:  ? Glyma.18G075300 Secondary Identifier:  ? PAC:30558651
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G075300 0.5kb upstream 0.5kb upstream 6587 true Chr18: 7144678-7151264 Glycine max
Glyma.18G075300 0.5kb upstream 0.5kb upstream 500 false Chr18: 7150765-7151264 Glycine max
Glyma.18G075300 0.5kb downstream 0.5kb downstream 6587 true Chr18: 7144178-7150764 Glycine max
Glyma.18G075300 0.5kb downstream 0.5kb downstream 500 false Chr18: 7144178-7144677 Glycine max
Glyma.18G075300 1.0kb upstream 1.0kb upstream 7087 true Chr18: 7144678-7151764 Glycine max
Glyma.18G075300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7150765-7151764 Glycine max
Glyma.18G075300 1.0kb downstream 1.0kb downstream 7087 true Chr18: 7143678-7150764 Glycine max
Glyma.18G075300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7143678-7144677 Glycine max
Glyma.18G075300 2.0kb upstream 2.0kb upstream 8087 true Chr18: 7144678-7152764 Glycine max
Glyma.18G075300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7150765-7152764 Glycine max
Glyma.18G075300 2.0kb downstream 2.0kb downstream 8087 true Chr18: 7142678-7150764 Glycine max
Glyma.18G075300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7142678-7144677 Glycine max
Glyma.18G075300 5.0kb upstream 5.0kb upstream 11087 true Chr18: 7144678-7155764 Glycine max
Glyma.18G075300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7150765-7155764 Glycine max
Glyma.18G075300 5.0kb downstream 5.0kb downstream 11087 true Chr18: 7139678-7150764 Glycine max
Glyma.18G075300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7139678-7144677 Glycine max
Glyma.18G075300 10.0kb upstream 10.0kb upstream 16087 true Chr18: 7144678-7160764 Glycine max
Glyma.18G075300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7150765-7160764 Glycine max
Glyma.18G075300 10.0kb downstream 10.0kb downstream 16087 true Chr18: 7134678-7150764 Glycine max
Glyma.18G075300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7134678-7144677 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302392 5265 Fabidae View MSA
124063723 5270 Rosid View MSA
123738682 5271 Pentapetalae View MSA
122789471 5272 Eudicot View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.27851 0.0 24.6082    
cufflinks 6.97439 0.0 27.7114    
cufflinks 4.43065 0.0 17.1652   Low
cufflinks 5.8211 0.0 25.2995    
cufflinks 8.7954 0.0 33.5064   High
cufflinks 5.60826 0.0 20.2458    
cufflinks 7.25761 0.0 28.5496    
cufflinks 5.5089 0.0 23.7708    
cufflinks 8.68617 0.0 33.0187   High
cufflinks 0.608        
cufflinks 0.277       Low
cufflinks 0.88        
cufflinks 1.482       High
cufflinks 2.168       High
cufflinks 0.43        
cufflinks 0.564        
cufflinks 0.501        
cufflinks 0.896        
cufflinks 1.161       High
cufflinks 0.295       Low
cufflinks 0.371        
cufflinks 0.408        
cufflinks 0.786        
cufflinks 0.243       Low
cufflinks 0.483        
cufflinks 0.487        

0 Strain