Gene : Glyma.18G077500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Genomic Order:  775
Name:  ? Glyma.18G077500 Secondary Identifier:  ? PAC:30557291
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G077500 0.5kb upstream 0.5kb upstream 2752 true Chr18: 7356219-7358970 Glycine max
Glyma.18G077500 0.5kb upstream 0.5kb upstream 500 false Chr18: 7358471-7358970 Glycine max
Glyma.18G077500 0.5kb downstream 0.5kb downstream 2752 true Chr18: 7355719-7358470 Glycine max
Glyma.18G077500 0.5kb downstream 0.5kb downstream 500 false Chr18: 7355719-7356218 Glycine max
Glyma.18G077500 1.0kb upstream 1.0kb upstream 3252 true Chr18: 7356219-7359470 Glycine max
Glyma.18G077500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7358471-7359470 Glycine max
Glyma.18G077500 1.0kb downstream 1.0kb downstream 3252 true Chr18: 7355219-7358470 Glycine max
Glyma.18G077500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7355219-7356218 Glycine max
Glyma.18G077500 2.0kb upstream 2.0kb upstream 4252 true Chr18: 7356219-7360470 Glycine max
Glyma.18G077500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7358471-7360470 Glycine max
Glyma.18G077500 2.0kb downstream 2.0kb downstream 4252 true Chr18: 7354219-7358470 Glycine max
Glyma.18G077500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7354219-7356218 Glycine max
Glyma.18G077500 5.0kb upstream 5.0kb upstream 7252 true Chr18: 7356219-7363470 Glycine max
Glyma.18G077500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7358471-7363470 Glycine max
Glyma.18G077500 5.0kb downstream 5.0kb downstream 7252 true Chr18: 7351219-7358470 Glycine max
Glyma.18G077500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7351219-7356218 Glycine max
Glyma.18G077500 10.0kb upstream 10.0kb upstream 12252 true Chr18: 7356219-7368470 Glycine max
Glyma.18G077500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7358471-7368470 Glycine max
Glyma.18G077500 10.0kb downstream 10.0kb downstream 12252 true Chr18: 7346219-7358470 Glycine max
Glyma.18G077500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7346219-7356218 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312378 5265 Fabidae View MSA
124072305 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3924 0.0 33.1533   High
cufflinks 6.01523 0.0 16.8384    
cufflinks 5.56125 0.0 15.7735    
cufflinks 5.7722 0.0 16.2221    
cufflinks 6.85625 0.0 18.8681    
cufflinks 2.57263 0.0 8.0009    
cufflinks 1.08997 0.0 3.78367   Low
cufflinks 9.66597 0.0 26.1209    
cufflinks 10.3568 0.0 27.8726    
cufflinks 3.54        
cufflinks 9.801     High  
cufflinks 3.77        
cufflinks 0.839       Low
cufflinks 0.429       Low
cufflinks 21.088     High High
cufflinks 8.928     High  
cufflinks 1.805        
cufflinks 2.46        
cufflinks 4.507        
cufflinks 14.766     High  
cufflinks 10.611     High  
cufflinks 11.343     High  
cufflinks 5.131        
cufflinks 13.973     High  
cufflinks 11.75     High  
cufflinks 5.16        

0 Strain