Gene : Glyma.18G077700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13468:SF1 - PROTEIN DEK Genomic Order:  777
Name:  ? Glyma.18G077700 Secondary Identifier:  ? PAC:30555098
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G077700 0.5kb upstream 0.5kb upstream 9571 true Chr18: 7388452-7398022 Glycine max
Glyma.18G077700 0.5kb upstream 0.5kb upstream 500 false Chr18: 7397523-7398022 Glycine max
Glyma.18G077700 0.5kb downstream 0.5kb downstream 9571 true Chr18: 7387952-7397522 Glycine max
Glyma.18G077700 0.5kb downstream 0.5kb downstream 500 false Chr18: 7387952-7388451 Glycine max
Glyma.18G077700 1.0kb upstream 1.0kb upstream 10071 true Chr18: 7388452-7398522 Glycine max
Glyma.18G077700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7397523-7398522 Glycine max
Glyma.18G077700 1.0kb downstream 1.0kb downstream 10071 true Chr18: 7387452-7397522 Glycine max
Glyma.18G077700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7387452-7388451 Glycine max
Glyma.18G077700 2.0kb upstream 2.0kb upstream 11071 true Chr18: 7388452-7399522 Glycine max
Glyma.18G077700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7397523-7399522 Glycine max
Glyma.18G077700 2.0kb downstream 2.0kb downstream 11071 true Chr18: 7386452-7397522 Glycine max
Glyma.18G077700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7386452-7388451 Glycine max
Glyma.18G077700 5.0kb upstream 5.0kb upstream 14071 true Chr18: 7388452-7402522 Glycine max
Glyma.18G077700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7397523-7402522 Glycine max
Glyma.18G077700 5.0kb downstream 5.0kb downstream 14071 true Chr18: 7383452-7397522 Glycine max
Glyma.18G077700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7383452-7388451 Glycine max
Glyma.18G077700 10.0kb upstream 10.0kb upstream 19071 true Chr18: 7388452-7407522 Glycine max
Glyma.18G077700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7397523-7407522 Glycine max
Glyma.18G077700 10.0kb downstream 10.0kb downstream 19071 true Chr18: 7378452-7397522 Glycine max
Glyma.18G077700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7378452-7388451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312420 5265 Fabidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0591 0.0 70.1154    
cufflinks 22.5467 0.0 97.4824 High High
cufflinks 15.0346 0.0 60.4775    
cufflinks 18.5751 0.0 77.8793    
cufflinks 10.9544 0.0 42.0856   Low
cufflinks 9.17482 0.0 34.9966   Low
cufflinks 16.1339 0.0 72.0417    
cufflinks 15.8867 0.0 64.5235    
cufflinks 18.3212 0.0 76.4919    
cufflinks 1.613        
cufflinks 1.553        
cufflinks 3.417       High
cufflinks 1.864        
cufflinks 1.504        
cufflinks 2.889        
cufflinks 2.954        
cufflinks 0.843       Low
cufflinks 3.684       High
cufflinks 2.532        
cufflinks 3.481       High
cufflinks 1.56        
cufflinks 3.541       High
cufflinks 2.112        
cufflinks 1.593        
cufflinks 3.335       High
cufflinks 1.538        

0 Strain