Gene : Glyma.18G078700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15680:SF9 - 39S RIBOSOMAL PROTEIN L19, MITOCHONDRIAL Genomic Order:  787
Name:  ? Glyma.18G078700 Secondary Identifier:  ? PAC:30557503
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G078700 0.5kb upstream 0.5kb upstream 4356 true Chr18: 7542533-7546888 Glycine max
Glyma.18G078700 0.5kb upstream 0.5kb upstream 500 false Chr18: 7542533-7543032 Glycine max
Glyma.18G078700 0.5kb downstream 0.5kb downstream 4356 true Chr18: 7543033-7547388 Glycine max
Glyma.18G078700 0.5kb downstream 0.5kb downstream 500 false Chr18: 7546889-7547388 Glycine max
Glyma.18G078700 1.0kb upstream 1.0kb upstream 4856 true Chr18: 7542033-7546888 Glycine max
Glyma.18G078700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7542033-7543032 Glycine max
Glyma.18G078700 1.0kb downstream 1.0kb downstream 4856 true Chr18: 7543033-7547888 Glycine max
Glyma.18G078700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7546889-7547888 Glycine max
Glyma.18G078700 2.0kb upstream 2.0kb upstream 5856 true Chr18: 7541033-7546888 Glycine max
Glyma.18G078700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7541033-7543032 Glycine max
Glyma.18G078700 2.0kb downstream 2.0kb downstream 5856 true Chr18: 7543033-7548888 Glycine max
Glyma.18G078700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7546889-7548888 Glycine max
Glyma.18G078700 5.0kb upstream 5.0kb upstream 8856 true Chr18: 7538033-7546888 Glycine max
Glyma.18G078700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7538033-7543032 Glycine max
Glyma.18G078700 5.0kb downstream 5.0kb downstream 8856 true Chr18: 7543033-7551888 Glycine max
Glyma.18G078700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7546889-7551888 Glycine max
Glyma.18G078700 10.0kb upstream 10.0kb upstream 13856 true Chr18: 7533033-7546888 Glycine max
Glyma.18G078700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7533033-7543032 Glycine max
Glyma.18G078700 10.0kb downstream 10.0kb downstream 13856 true Chr18: 7543033-7556888 Glycine max
Glyma.18G078700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7546889-7556888 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312968 5265 Fabidae View MSA
124072223 5270 Rosid View MSA
123746974 5271 Pentapetalae View MSA
122793456 5272 Eudicot View MSA
122044043 5273 Angiosperm View MSA
123428995 5275 Viridiplantae View MSA
121349577 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2847 0.0 51.9984    
cufflinks 18.621 0.0 50.2963    
cufflinks 8.30615 0.0 24.0341   Low
cufflinks 12.8808 0.0 35.6503    
cufflinks 25.6728 0.0 68.5972 High  
cufflinks 16.2865 0.0 44.3149    
cufflinks 29.667 0.0 79.1566 High High
cufflinks 13.9915 0.0 38.4663    
cufflinks 24.5065 0.0 65.5263 High  
cufflinks 2.747        
cufflinks 2.395        
cufflinks 3.714        
cufflinks 7.579     High High
cufflinks 11.978     High High
cufflinks 4.051        
cufflinks 2.178        
cufflinks 3.052        
cufflinks 4.302        
cufflinks 4.57        
cufflinks 1.356       Low
cufflinks 2.238        
cufflinks 1.8        
cufflinks 1.961        
cufflinks 2.186        
cufflinks 1.771        
cufflinks 3.076        

0 Strain